DRSC/TRiP Functional Genomics Resources

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Protein Alignment PCGF2 and Sce

DIOPT Version :10

Sequence 1:NP_009075.1 Gene:PCGF2 / 7703 HGNCID:12929 Length:344 Species:Homo sapiens
Sequence 2:NP_477509.1 Gene:Sce / 43327 FlyBaseID:FBgn0003330 Length:435 Species:Drosophila melanogaster


Alignment Length:332 Identity:72/332 - (21%)
Similarity:106/332 - (31%) Gaps:112/332 - (33%)


- Green bases have known domain annotations that are detailed below.


Human     4 TTRIKIT--ELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 65
            :|.|.::  .|:..|||.:|........|..||||.||..|||..|.: ||.||.|..::...| 
  Fly    30 STEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKR- 93

Human    66 LLSIRSDKTLQDIVYKLVPGLFKDEMKRRRDFYAAYPLTEVPNGSNEDRGEVLEQEKGALSDDEI 130
              |:|:|.....::.|:.|.         |:.|.|.            :.:|:.:.....|...:
  Fly    94 --SLRADPNFDLLISKIYPS---------REEYEAI------------QEKVMAKFNQTQSQQAL 135

Human   131 VSLSIEFYEGAR-------DRDEKKGPLENGDGDKEKTGVRFLRCPAAM-TVMHLAKFLRNKMDV 187
            |: ||.  ||.:       .|...||....|.|.....|...:..|.|. ....:.:...|:|.|
  Fly   136 VN-SIN--EGIKLQSQNRPQRFRTKGGGGGGGGGGNGNGAANVAAPPAPGAPTAVGRNASNQMHV 197

Human   188 PSKYKVEVLYEDEPLKEYYTLMDIAYIYPWRRNGPLPLKYRVQPACKRLTLATVPTPSEGTN--- 249
            ..                                                     |.|..:|   
  Fly   198 HD-----------------------------------------------------TASNDSNSNT 209

Human   250 --------------TSGASECESVSDKAPSPATLPATSSSLPSPATPSHGSPSSHGPPATHPTSP 300
                          ||.||...|.|:.|||.:.....|:|    ||......:|:.|......||
  Fly   210 NSIDRENRDPGHSGTSAASAITSASNAAPSSSANSGASTS----ATRMQVDDASNPPSVRSTPSP 270

Human   301 TPPSTAS 307
            .|.:::|
  Fly   271 VPSNSSS 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PCGF2NP_009075.1 RING-HC_PCGF4 5..101 CDD:438394 31/98 (32%)
Nuclear localization signal. /evidence=ECO:0000255 81..95 2/13 (15%)
RAWUL_PCGF2 130..228 CDD:340684 16/105 (15%)
PLN02217 <236..328 CDD:215130 22/89 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 240..344 22/85 (26%)
SceNP_477509.1 COG5222 <10..154 CDD:227547 39/150 (26%)
RING_Ubox 41..110 CDD:473075 25/71 (35%)
RAWUL_RING1_like 326..431 CDD:340606
Blue background indicates that the domain is not in the aligned region.

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