DRSC/TRiP Functional Genomics Resources

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Protein Alignment PCGF2 and Psc

DIOPT Version :10

Sequence 1:NP_009075.1 Gene:PCGF2 / 7703 HGNCID:12929 Length:344 Species:Homo sapiens
Sequence 2:NP_523725.2 Gene:Psc / 36431 FlyBaseID:FBgn0005624 Length:1601 Species:Drosophila melanogaster


Alignment Length:434 Identity:136/434 - (31%)
Similarity:203/434 - (46%) Gaps:107/434 - (24%)


- Green bases have known domain annotations that are detailed below.


Human     3 RTTRIKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLETNKYCPMCDVQVHKTRPLL 67
            |...:.:|.:|||::|.||.||.|:||||||||||||.:|::.:|...::||.|::.::..:|  
  Fly   248 RPRPVLLTAVNPHIICHLCQGYLINATTIVECLHSFCHSCLINHLRKERFCPRCEMVINNAKP-- 310

Human    68 SIRSDKTLQDIVYKLVPGLFKDEMKRRRDFYAAYPLTEVPNGSNEDRGEVLEQEKGALSDDEIVS 132
            :|:||.|||.|||||||||::.|:.|:|.||...| .|....:.|.||:..|....:.|||  :|
  Fly   311 NIKSDTTLQAIVYKLVPGLYERELMRKRAFYKDRP-EEAALATPEQRGDDTEHLIFSPSDD--MS 372

Human   133 LSIEFYEGARDRDEKKGPLENGDGDKEKTGV---RFLRCPAAMTVMHLAKFLRNKMDVPS-KYKV 193
            ||:|:.|        .|.|:. |.:.|....   |:|:|||...|.||.||:.:|.::.: ::.:
  Fly   373 LSLEYAE--------LGELKT-DSEPELVDTLRPRYLQCPAMCRVSHLKKFVYDKFEIDAQRFSI 428

Human   194 EVLYEDEP--LKEYYTLMDIAYIYPWRRNGPLPLKYR--------VQPACKRL------------ 236
            :::|:.:.  |.:|||||||||||.|:|:.|:...||        |:||.:|:            
  Fly   429 DIMYKVKTIVLLDYYTLMDIAYIYTWKRDAPMRFYYRVYESPQPLVKPAPRRVLPLKLEKQEREN 493

Human   237 ---TLA-----------TVPTPSEGTNTSGASECES--------VSDKAPSPAT----------- 268
               .||           ::|...:...:....|.||        :.|.|.:|.|           
  Fly   494 QEQQLAVEVASSKVEPVSLPEDQKAEASIKVEEQESTREIVKEVIKDVAATPPTETLKLVINRNM 558

Human   269 -----------LPATSSSLPSPATPSHGSPSS--------------------HGPPATHPTSPTP 302
                       :.:.|||..||.||. .|||.                    ..|.......|..
  Fly   559 LDKREKSHSPQMSSKSSSKSSPCTPV-SSPSEPNIKLKIDLSKQNSVTIIDMSDPERREIVKPLK 622

Human   303 PSTASGATTAANGGSLNCLQTPSSTSRGRKMTVNGAP--VPPLT 344
            |...|.:......||.....:.||:|.|.:...:.:|  |||||
  Fly   623 PEKESRSKKKDKDGSPKSSSSSSSSSSGERKRKSPSPLTVPPLT 666

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PCGF2NP_009075.1 RING-HC_PCGF4 5..101 CDD:438394 48/95 (51%)
Nuclear localization signal. /evidence=ECO:0000255 81..95 8/13 (62%)
RAWUL_PCGF2 130..228 CDD:340684 36/103 (35%)
PLN02217 <236..328 CDD:215130 28/167 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 240..344 32/155 (21%)
PscNP_523725.2 RING_Ubox 254..341 CDD:473075 46/88 (52%)
RAWUL_PCGF2_like 371..465 CDD:340602 36/102 (35%)
PHA03247 <1160..1381 CDD:223021
Blue background indicates that the domain is not in the aligned region.

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