DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cers2 and schlank

DIOPT Version :10

Sequence 1:NP_084065.1 Gene:Cers2 / 76893 MGIID:1924143 Length:380 Species:Mus musculus
Sequence 2:NP_652526.1 Gene:schlank / 50392 FlyBaseID:FBgn0040918 Length:400 Species:Drosophila melanogaster


Alignment Length:367 Identity:138/367 - (37%)
Similarity:212/367 - (57%) Gaps:6/367 - (1%)


- Green bases have known domain annotations that are detailed below.


Mouse     1 MLQTLYDYFWWERLWLPVNLTWADLE--DKDGRVYAKASDLYITLPLALLFLVIRYFFELYVATP 63
            :|....:.||...:|||.|.||||:.  .:...|:|...||...:|.|.:.:::||..|.:..:|
  Fly     3 ILNEFSNVFWSTHIWLPPNTTWADIAPGSRPDVVHANYKDLIWPIPFAAVVMLVRYTLERFWISP 67

Mouse    64 LAALLNVKEKTRLRAPPNATLEHFYQTSGKQPKQVEVDLLSRQSGLSGRQVERWFRRRRNQDRPS 128
            :...|.::.....:|.....||..|..|.:..|:..|. ||:|:.:|.|::|||:|.||.||:||
  Fly    68 VGKSLGIRSSRPKKAANVPILEKTYAKSTRLDKKKLVP-LSKQTDMSEREIERWWRLRRAQDKPS 131

Mouse   129 LLKKFREASWRFTYYLIAFVAGMAVTVDKPWFYDLRKVWEGYPIQSIIPSQYWYYMIELSFYWSL 193
            .|.||.|.:||..|||.:|:.|:.|..|||||:|::..|.|||.|||....:|||||.:||||||
  Fly   132 TLVKFCENTWRCIYYLYSFIFGVIVLWDKPWFWDVKSCWYGYPHQSISNDIWWYYMISMSFYWSL 196

Mouse   194 LFSIASDVKRKDFKEQIIHHVATIILLCFSWFANYVRAGTLIMALHDASDYLLESAKMFNYAGWK 258
            ..:...|||||||.:..|||:.|::|:..||..|..|.|:|::.:||.:|..||:||:..||.::
  Fly   197 TGTQFFDVKRKDFWQMFIHHMVTLLLMSLSWVCNLHRVGSLVLVVHDCADIFLEAAKLTKYAKYQ 261

Mouse   259 NTCNNLFIVFAIVFIITRLVIMPFWILHCTMIYPLELYPAFFGYYFFNFMMAVLQMLHIFWAYFI 323
            ..|:.:|.:|.:|:|:|||...| .|::.:.:....:.|.|..||.||.::.:|.:||:.|.|.|
  Fly   262 KLCDAIFAIFTVVWIVTRLGFYP-RIIYSSSVEAPRILPMFPAYYIFNSLLLMLLVLHVIWTYMI 325

Mouse   324 LRMAHKFITGKLIEDE--RSDREETESSEGEETAAGAGAKSR 363
            |::....:...|:..:  .||.|:...|.|........|:|:
  Fly   326 LKIVVDSLQKGLMSGDIRSSDSEDLTDSSGNARLTNGSARSK 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cers2NP_084065.1 Homeobox-like. /evidence=ECO:0000305 67..128 21/60 (35%)
homeodomain 71..128 CDD:238039 20/56 (36%)
TLC 131..332 CDD:214789 85/200 (43%)
Last loop motif. /evidence=ECO:0000250|UniProtKB:Q96G23 291..300 1/8 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 340..380 7/24 (29%)
schlankNP_652526.1 homeodomain 75..131 CDD:238039 20/56 (36%)
TLC 135..334 CDD:214789 85/199 (43%)

Return to query results.
Submit another query.