Protein Alignment khdrbs2 and how

DIOPT Version :9

• Sequence 1: NP_001070758.1
• Gene: khdrbs2 / 768147
• ZFINID: ZDB-GENE-061013-497
• Length: 346
• Species: Danio rerio
• Sequence 2: NP_001262822.1
• Gene: how / 42596
• FlyBaseID: FBgn0264491
• Length: 418
• Species: Drosophila melanogaster
• Alignment Length: 381
• Identity: 112/381 - (29%)
• Similarity: 175/381 - (45%)
• Gaps: 97/381 - (25%)

Zfish     6 YLPELVAEKESLDA---SFVHAMRLLAEEIEKFEGDELRKDGEVKKYLDIISNKN--IKLSERVL 65
            ||.:|:.:::.|.|   .|.|..|||.|||.:......:.:|..|:.|.:...:.  :.::|:|.
  Fly    78 YLAQLLKDRKQLAAFPNVFTHVERLLDEEIARVRASLFQINGVKKEPLTLPEPEGSVVTMNEKVY 142

Zfish    66 IPVQQYPKFNFVGKLLGPRGNSMKRLQEETGAKMSILGKGSMRDKGKEEELRKSGEAKYAHLSND 130
            :||:::|.|||||::|||||.:.|:|::|||.|:.:.||||||||.||:..|  |:..:.|||:|
  Fly   143 VPVREHPDFNFVGRILGPRGMTAKQLEQETGCKIMVRGKGSMRDKKKEDANR--GKPNWEHLSDD 205

Zfish   131 LHVLIEVFAPPGEAYSRMSHALEEIKKFLVP--DYNDEIRQEQLRELSYLNGS------------ 181
            |||||.|......|..:::.|:.|::|.|||  :..||:::.||.||:.:||:
  Fly   206 LHVLITVEDTENRATVKLAQAVAEVQKLLVPQAEGEDELKKRQLMELAIINGTYRDTTAKSVAAF 270

Zfish   182 --------------DDPSRGRSARGRGLRLTSTASPRGRGSAAPPAPPGRGAAAPRGT---VSSR 229
                          |:..|...|......||||..|   |.||....|   ||||.|.   ::.|
  Fly   271 SCVGSASYLYPAVCDEEWRRLVAASDSRLLTSTGLP---GLAAQIRAP---AAAPLGAPLILNPR 329

Zfish   230 TSVPTPARGVSAPRTRGTAGTPGYRAPSLQATHKTYEDYGYDDGYDGEYDDQSYESYDDN----- 289
            .:|||.|..:.:.:...||               .::..|:...: ..||..:|.:...|
  Fly   330 MTVPTTAASILSAQAAPTA---------------AFDQTGHGMIF-APYDYANYAALAGNPLLTE 378

Zfish   290 YSNQSKSVSEYYEYGHGNNDENYNNYEEDWISSRPNLKAPASRLTRGGYRDHPYGR 345
            |::.|.::.:                              ..||...  |:|||.|
  Fly   379 YADHSGAIKQ------------------------------QRRLATN--REHPYQR 402

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
khdrbs2	NP_001070758.1	Qua1	6..57	CDD:292891	16/53 (30%)
		SF1_like-KH	61..180	CDD:239088	56/120 (47%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	175..292		33/150 (22%)
		Sam68-YY	<281..>306	CDD:293176	4/29 (14%)
how	NP_001262822.1	STAR_dimer	75..123	CDD:293152	14/44 (32%)
		SF1_like-KH	139..260	CDD:239088	58/122 (48%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5176
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	3	2.810