DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment spata5l1 and TER94

DIOPT Version :9

Sequence 1:NP_001070056.2 Gene:spata5l1 / 767648 ZFINID:ZDB-GENE-060929-204 Length:748 Species:Danio rerio
Sequence 2:NP_001097249.1 Gene:TER94 / 36040 FlyBaseID:FBgn0286784 Length:826 Species:Drosophila melanogaster


Alignment Length:807 Identity:255/807 - (31%)
Similarity:407/807 - (50%) Gaps:144/807 - (17%)


- Green bases have known domain annotations that are detailed below.


Zfish    10 DAVDVDTQRCRMGPALMSSLGLRLGSPVLI---RVLQGTCLCTAWPRRDLADGYLQISSQCVSPD 71
            :|.:.|.....:..|.|..|.|..|..|::   |..:..|:               :.|....||
  Fly    52 EAQNDDNSVVSLSQAKMDELQLFRGDTVILKGKRRKETVCI---------------VLSDDTCPD 101

Zfish    72 ----LHKHTLTALTVHPAQIKPLTCLKLTCVKLKVFVQRLEHKKRVSERSLQELLDGI------- 125
                :::.....|.||.:.:..:.    :|..:|       :.|||....:.|..:|:       
  Fly   102 EKIRMNRVVRNNLCVHLSDVVSVQ----SCPDVK-------YGKRVRILPIDESTEGVTGNLFEI 155

Zfish   126 ----YVHEG----HLVDLSGVKAEIRCVLVEKVNSGSQRAGLITARTCV--DISTIQTVKHLDRQ 180
                |..|.    |:.|...|:|.:|.:..:.|.:..:...::...|.:  |...|:.    :.:
  Fly   156 YLKPYFLEAYRPIHMGDNFIVRAAMRPIEFKVVLTDPEPYCIVAPETVIFCDGDPIKR----EEE 216

Zfish   181 QQQVSAA---PLGGMEDVFASLKEMITFPLRYPGSLRQLGLSCPRGLLLIGPPGVGKTLLVRCVA 242
            ::.::|.   .:||.....|.:|||:..|||:|...:.:|:..|||:|:.||||.||||:.|.||
  Fly   217 EESLNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVA 281

Zfish   243 KDIGATLVTVNGPEVTGSRPGESEENLRRVFEQARDAADDGPCVLLIDEIDSLCPRRTGSSSAPE 307
            .:.||....:||||:.....||||.|||:.||:|.   .:.|.::.|||||::.|:|..:....|
  Fly   282 NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAE---KNSPAIIFIDEIDAIAPKRDKTHGEVE 343

Zfish   308 NRLVAQLLTLMDAIGSHEGFVIIGATNQPDSLDPALRRPGRFDREVIIGVPSLLQRRSILKCVCR 372
            .|:|:|||||||.:......:::.|||:|:|:||||||.||||||:.||:|....|..:|:...:
  Fly   344 RRIVSQLLTLMDGMKKSSHLIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEVLRIHTK 408

Zfish   373 EMPLSPDVDLNTLAEMTCGYVGADLSALSREAALQAMRH-------------SQMGASEPVSMQH 424
            .|.|..||||..:|..:.|:|||||::|..|||||.:|.             :::.||..|:|::
  Fly   409 NMKLHDDVDLEQIAAESHGHVGADLASLCSEAALQQIREKMDLIDLEDDKIDAEVLASLAVTMEN 473

Zfish   425 FMQALRHVQPSCLRSSIGATDFKPIGWEQIGGLEDVKLKLKQSIEWPMRFPEAFVRLGVSRPRGV 489
            |..|:....||.||.::  .:.....|..|||||.||.:|::.:::|:..|:.|::.|:...|||
  Fly   474 FRYAMTKSSPSALRETV--VEVPNTTWTDIGGLESVKKELQELVQYPVEHPDKFLKFGMQPSRGV 536

Zfish   490 LLYGPPGCAKTTLVKAAASSSHCSFFSLSGAELFSPYVGDSEKTLAQLFAQARACAPSIVFLDEV 554
            |.||||||.||.|.||.|:....:|.|:.|.||.:.:.|:||..:..:|.:||:.||.::|.||:
  Fly   537 LFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSAAPCVLFFDEL 601

Zfish   555 DSMVGSREDGSSSSHSVQSQVLSVLLTELDGVGVRTLERRSTCRKIALLEGGDQEDVRLHQMELQ 619
            ||:..:|......:.....:|::.:|||:||:|.:                              
  Fly   602 DSIAKARGGNVGDAGGAADRVINQILTEMDGMGAK------------------------------ 636

Zfish   620 EVCNKDVLIVAATNRPEALDSALLRPGRLDQIIYVPPPDLQARLAVLRICTKSVPLHQDVCLEDL 684
                |:|.|:.|||||:.:|.|:||||||||:||:|.||.::|.|:|:...:..||.::|.|..:
  Fly   637 ----KNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDDKSREAILKANLRKSPLAKEVDLTYI 697

Zfish   685 AAQTELFSGADLENLCKEAALLALREDGLAVSCVRQK------------------------YFLK 725
            |..|:.||||||..:|:.|..||:|: .:.....|:|                        :|.:
  Fly   698 AKVTQGFSGADLTEICQRACKLAIRQ-AIEAEIRREKERAENQNSAMDMDEDDPVPEITSAHFEE 761

Zfish   726 ALQMLSPSLS----------AEQLQQN 742
            |::....|:|          |:.|||:
  Fly   762 AMKFARRSVSDNDIRKYEMFAQTLQQS 788

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spata5l1NP_001070056.2 CDC48 13..740 CDD:273521 251/800 (31%)
AAA 224..357 CDD:278434 64/132 (48%)
AAA 489..655 CDD:278434 60/165 (36%)
TER94NP_001097249.1 CDC48 47..787 CDD:273521 253/804 (31%)
CDC48_N 47..129 CDD:280513 17/95 (18%)
CDC48_2 153..213 CDD:215011 11/59 (19%)
AAA 263..392 CDD:278434 63/131 (48%)
AAA 536..669 CDD:278434 60/166 (36%)
Vps4_C <741..783 CDD:286426 4/41 (10%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0464
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D169540at33208
OrthoFinder 1 1.000 - - FOG0000137
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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