DRSC/TRiP Functional Genomics Resources

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Protein Alignment ZNF84 and CTCF

DIOPT Version :9

Sequence 1:NP_001120844.1 Gene:ZNF84 / 7637 HGNCID:13159 Length:738 Species:Homo sapiens
Sequence 2:NP_648109.1 Gene:CTCF / 38817 FlyBaseID:FBgn0035769 Length:818 Species:Drosophila melanogaster


Alignment Length:337 Identity:115/337 - (34%)
Similarity:163/337 - (48%) Gaps:13/337 - (3%)


- Green bases have known domain annotations that are detailed below.


Human   354 KAFSRKSQLVTHHRTHTGTKPFGCSDCRKAFFEKSELIRHQTIHTGEKPYECSECRKAFRERSSL 418
            |....|:...|...::.....:.|..|.....:|..:.||...|..|..::||.|.::||....|
  Fly   273 KEVKLKTASSTSQNSNASGHKYSCPHCPYTASKKFLITRHSRSHDVEPSFKCSICERSFRSNVGL 337

Human   419 INHQRTHTGEKPHGCIQCGKAFSQKSHLISH-QMTHTGEKPFICSKCGKAFSRKSQLVRHQRTHT 482
            .||..||.|.|||.|..|..||:....|:.| :..||.|||..|::|..|....::|.||...||
  Fly   338 QNHINTHMGNKPHKCKLCESAFTTSGELVRHTRYKHTKEKPHKCTECTYASVELTKLRRHMTCHT 402

Human   483 GEKPYECSECGKAFSEKLSLTNHQRIHTGEKPYVCSECGKAFCQKSHLISHQRTHT-GEKP-YEC 545
            ||:||:|..|..|..:...|..|..||||||.|.|..|...|.|.:.|.:|:..|: .:|| ::|
  Fly   403 GERPYQCPHCTYASQDMFKLKRHMVIHTGEKKYQCDICKSRFTQSNSLKAHKLIHSVVDKPVFQC 467

Human   546 SECGKAFGEKSSLATH-QRTHTGEKPYECRDCEKAFSQKSQLNTHQRIHTGEKPYECSLCRKAFF 609
            :.|....|.|:.|..| :..||.:.|..||.|.:....:.|...|.:.|.|||.|.|.||..|..
  Fly   468 NYCPTTCGRKADLRVHIKHMHTSDVPMTCRRCGQQLPDRYQYKLHVKSHEGEKCYSCKLCSYASV 532

Human   610 EKSELIRHLRTHTGEKPYECNECRKAFREKSSLINHQR-IHT--------GEKPFECSECGKAFS 665
            .:..|..|:..|..|||:.|::|.:|||::..|..|.. :|.        .||..:|..|.:.|:
  Fly   533 TQRHLASHMLIHLDEKPFHCDQCPQAFRQRQLLRRHMNLVHNEEYQPPEPREKLHKCPSCPREFT 597

Human   666 RKSHLIPHQRTH 677
            .|.:|:.|..||
  Fly   598 HKGNLMRHMETH 609

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZNF84NP_001120844.1 KRAB 9..68 CDD:214630
C2H2 Zn finger 209..229 CDD:275368
C2H2 Zn finger 237..257 CDD:275368
C2H2 Zn finger 265..285 CDD:275368
zf-H2C2_2 278..302 CDD:316026
C2H2 Zn finger 293..313 CDD:275368
COG5048 317..724 CDD:227381 115/337 (34%)
C2H2 Zn finger 321..341 CDD:275368
C2H2 Zn finger 349..369 CDD:275368 3/14 (21%)
C2H2 Zn finger 377..397 CDD:275368 5/19 (26%)
C2H2 Zn finger 405..425 CDD:275368 8/19 (42%)
C2H2 Zn finger 433..453 CDD:275368 6/20 (30%)
C2H2 Zn finger 461..481 CDD:275368 6/19 (32%)
C2H2 Zn finger 489..509 CDD:275368 5/19 (26%)
C2H2 Zn finger 517..537 CDD:275368 6/19 (32%)
C2H2 Zn finger 545..565 CDD:275368 6/20 (30%)
C2H2 Zn finger 573..593 CDD:275368 5/19 (26%)
C2H2 Zn finger 601..621 CDD:275368 6/19 (32%)
C2H2 Zn finger 629..649 CDD:275368 7/20 (35%)
C2H2 Zn finger 657..677 CDD:275368 6/19 (32%)
C2H2 Zn finger 685..705 CDD:275368
C2H2 Zn finger 713..733 CDD:275368
CTCFNP_648109.1 23ISL <116..206 CDD:293226
C2H2 Zn finger 296..316 CDD:275368 5/19 (26%)
COG5048 321..>621 CDD:227381 105/289 (36%)
zf-C2H2 322..344 CDD:278523 8/21 (38%)
C2H2 Zn finger 324..344 CDD:275368 8/19 (42%)
zf-H2C2_2 337..361 CDD:290200 13/23 (57%)
C2H2 Zn finger 352..373 CDD:275368 6/20 (30%)
C2H2 Zn finger 381..401 CDD:275368 6/19 (32%)
zf-H2C2_2 394..415 CDD:290200 11/20 (55%)
C2H2 Zn finger 409..429 CDD:275368 5/19 (26%)
zf-H2C2_2 422..446 CDD:290200 12/23 (52%)
C2H2 Zn finger 437..457 CDD:275368 6/19 (32%)
C2H2 Zn finger 467..485 CDD:275368 6/17 (35%)
C2H2 Zn finger 496..516 CDD:275370 5/19 (26%)
C2H2 Zn finger 524..544 CDD:275368 6/19 (32%)
zf-H2C2_2 536..561 CDD:290200 10/24 (42%)
C2H2 Zn finger 552..573 CDD:275368 7/20 (35%)
zf-C2H2 587..609 CDD:278523 6/21 (29%)
C2H2 Zn finger 589..609 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
00.000

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