DRSC/TRiP Functional Genomics Resources

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Protein Alignment ZNF43 and CG4854

DIOPT Version :9

Sequence 1:NP_001243582.1 Gene:ZNF43 / 7594 HGNCID:13109 Length:818 Species:Homo sapiens
Sequence 2:NP_650860.1 Gene:CG4854 / 42391 FlyBaseID:FBgn0038766 Length:319 Species:Drosophila melanogaster


Alignment Length:174 Identity:67/174 - (38%)
Similarity:93/174 - (53%) Gaps:19/174 - (10%)


- Green bases have known domain annotations that are detailed below.


Human   349 KPYTC--EECGKAFNQFSNLTTHKRIHTAEKFYKCTECGEAFSRSSNLTKHKKIHTEKKPYKCEE 411
            ||.|.  |:.|:|.:                 :.|..|...:|....||.|.|:|:.|||::||.
  Fly   163 KPVTFEDEDSGQAAS-----------------FTCNICNNVYSERVKLTNHMKVHSAKKPHECEI 210

Human   412 CGKAFKWSSKLTEHKLTHTGEKPYKCEECGKAFNWPSTLTKHNRIHTGEKPYKCEVCGKAFNQFS 476
            |.|.|:.:.:|..|..||||.:||||:.|...|..|||..||.||||.|:|||||.|.::|...:
  Fly   211 CHKRFRQTPQLARHMNTHTGNRPYKCDYCDSRFADPSTRIKHQRIHTNERPYKCEFCSRSFGYSN 275

Human   477 NLTTHKRIHTAEKPYKCEECGKAFSRSSNLTKHKKIHIEKKPYK 520
            .|..|.:.||.|:|:.|:.|.|:||:..:...|:|.|...|..|
  Fly   276 VLRVHLKTHTGERPFSCQYCQKSFSQLHHKNSHEKSHKRTKEVK 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZNF43NP_001243582.1 KRAB 13..72 CDD:214630
KRAB 13..52 CDD:279668
C2H2 Zn finger 158..177 CDD:275370
C2H2 Zn finger 185..205 CDD:275368
C2H2 Zn finger 213..233 CDD:275368
C2H2 Zn finger 241..261 CDD:275368
C2H2 Zn finger 269..289 CDD:275368
COG5048 295..763 CDD:227381 67/174 (39%)
C2H2 Zn finger 297..317 CDD:275368
zf-H2C2_2 309..333 CDD:290200
C2H2 Zn finger 325..345 CDD:275368
zf-H2C2_2 338..362 CDD:290200 6/14 (43%)
C2H2 Zn finger 353..373 CDD:275368 3/21 (14%)
C2H2 Zn finger 381..401 CDD:275368 7/19 (37%)
zf-H2C2_2 393..417 CDD:290200 12/23 (52%)
C2H2 Zn finger 409..429 CDD:275368 7/19 (37%)
zf-H2C2_2 422..445 CDD:290200 11/22 (50%)
C2H2 Zn finger 437..457 CDD:275368 9/19 (47%)
zf-H2C2_2 450..474 CDD:290200 14/23 (61%)
C2H2 Zn finger 465..485 CDD:275368 6/19 (32%)
zf-H2C2_2 477..502 CDD:290200 10/24 (42%)
C2H2 Zn finger 521..541 CDD:275368 67/174 (39%)
zf-H2C2_2 534..558 CDD:290200
C2H2 Zn finger 549..569 CDD:275368
zf-H2C2_2 562..586 CDD:290200
C2H2 Zn finger 577..597 CDD:275368
zf-H2C2_2 589..614 CDD:290200
C2H2 Zn finger 605..625 CDD:275368
zf-H2C2_2 617..642 CDD:290200
C2H2 Zn finger 633..653 CDD:275368
C2H2 Zn finger 661..681 CDD:275368
zf-H2C2_2 674..697 CDD:290200
C2H2 Zn finger 689..709 CDD:275368
zf-H2C2_2 702..726 CDD:290200
C2H2 Zn finger 717..737 CDD:275368
zf-H2C2_2 729..754 CDD:290200
COG5048 742..>803 CDD:227381
C2H2 Zn finger 745..765 CDD:275368
zf-H2C2_2 757..782 CDD:290200
C2H2 Zn finger 773..793 CDD:275368
CG4854NP_650860.1 zf-AD 12..>57 CDD:285071
C2H2 Zn finger 180..200 CDD:275368 7/19 (37%)
zf-H2C2_2 193..217 CDD:290200 13/23 (57%)
COG5048 201..>258 CDD:227381 28/56 (50%)
C2H2 Zn finger 208..228 CDD:275368 7/19 (37%)
zf-H2C2_2 221..244 CDD:290200 11/22 (50%)
C2H2 Zn finger 236..256 CDD:275368 9/19 (47%)
zf-H2C2_2 251..273 CDD:290200 14/21 (67%)
C2H2 Zn finger 264..284 CDD:275368 6/19 (32%)
zf-H2C2_2 277..301 CDD:290200 10/23 (43%)
C2H2 Zn finger 292..312 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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