DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ZNF23 and CTCF

DIOPT Version :9

Sequence 1:NP_001368913.1 Gene:ZNF23 / 7571 HGNCID:13023 Length:686 Species:Homo sapiens
Sequence 2:NP_648109.1 Gene:CTCF / 38817 FlyBaseID:FBgn0035769 Length:818 Species:Drosophila melanogaster


Alignment Length:611 Identity:155/611 - (25%)
Similarity:248/611 - (40%) Gaps:59/611 - (9%)


- Green bases have known domain annotations that are detailed below.


Human    67 EGGSELGGSSPL-AAGTGLQGLQTVDIQTDNDLTKEMYEGKENVSF--------ELQRDFSQETD 122
            |.|:|.|||.|: .|...|...:..:.:.::|..|...:.:.|...        |||:...|   
  Fly    50 ENGAEAGGSKPMEEAEADLDHAEEAEEEEEDDEDKYFIDDEGNCYIKTTPKKQKELQKKLKQ--- 111

Human   123 FSEASLLEKQQEVHSAGNIKKEKSNTIDGTVKDETS---PVEECFFSQSSNSYQCHTITGEQPSG 184
             :.|...:..:.|.|....|.........|.|..||   |..:....:.:.:..........|..
  Fly   112 -AAAKPGKATRSVVSTATNKSINLRPAKSTPKATTSKPPPEPKAISVRPARAAAAKAKQSAMPPP 175

Human   185 CTGLGKSISFDTKLVKHEIINSEERPF----KCEELVEPFRCDSQLIQHQENNTEEKPYQCSECG 245
            ...:.|..:...:..|:.:|...| |.    :.||||:.....|.:.:..:...:|...:.:.. 
  Fly   176 PALVVKVPAPRGRPRKNPVIPKPE-PMDLERELEELVDEPDISSMVTELSDYTVDEAAVEAATA- 238

Human   246 KAFSINEKLIWH-------QRLHSGEKPFKCVECGKSFSYSSHYITHQTIHSGEKPYQCKMCGKA 303
             ..:.||..::.       :..::.:|....|...|.....:...|.|..::....|.|..|...
  Fly   239 -TLTPNEAEVYEFEDNATTEDENADKKDVDFVLSNKEVKLKTASSTSQNSNASGHKYSCPHCPYT 302

Human   304 FSVNGSLSRHQRIHTGEKPYQCKECGNGFSCSSAYITHQRVHTGEKPYECNDCGKAFNVNAKLIQ 368
            .|....::||.|.|..|..::|..|...|..:.....|...|.|.||::|..|..||..:.:|::
  Fly   303 ASKKFLITRHSRSHDVEPSFKCSICERSFRSNVGLQNHINTHMGNKPHKCKLCESAFTTSGELVR 367

Human   369 HQRI-HTGEKPYECNECGKGFRCSSQLRQHQSIHTGEKPYQCKECGKGFNNNTKLIQHQRIHTGE 432
            |.|. ||.|||::|.||.......::||:|.:.||||:||||..|.....:..||.:|..|||||
  Fly   368 HTRYKHTKEKPHKCTECTYASVELTKLRRHMTCHTGERPYQCPHCTYASQDMFKLKRHMVIHTGE 432

Human   433 KPYECTECGKAFSVKGKLIQHQRIHT-GEKP-YECNECGKAFRCNSQFRQHLR-IHTGEKPYECN 494
            |.|:|..|...|:....|..|:.||: .:|| ::||.|.......:..|.|:: :||.:.|..|.
  Fly   433 KKYQCDICKSRFTQSNSLKAHKLIHSVVDKPVFQCNYCPTTCGRKADLRVHIKHMHTSDVPMTCR 497

Human   495 ECGKAFSVNGKLMRHQRIHTGEKPFECNECGRCFTSKRNLLDHHRIHTGEKPYQCKECGKAFSIN 559
            .||:......:...|.:.|.|||.:.|..|.....::|:|..|..||..|||:.|.:|.:||...
  Fly   498 RCGQQLPDRYQYKLHVKSHEGEKCYSCKLCSYASVTQRHLASHMLIHLDEKPFHCDQCPQAFRQR 562

Human   560 AKLTRHQR-IHTGEKPFKCMECEKAFSCSSNYIVHQRIHTGEKPFQCKECGKAFHVNAHLIRHQR 623
            ..|.||.. :|..|                    :|.....||..:|..|.:.|....:|:||..
  Fly   563 QLLRRHMNLVHNEE--------------------YQPPEPREKLHKCPSCPREFTHKGNLMRHME 607

Human   624 SH----TGEKPFRCVECGKGFSFSSD 645
            :|    ...:..|.::.|:......|
  Fly   608 THDDSANAREKRRRLKLGRNVRLQKD 633

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZNF23NP_001368913.1 KRAB 14..73 CDD:214630 3/5 (60%)
C2H2 Zn finger 185..205 CDD:275368 2/19 (11%)
C2H2 Zn finger 213..233 CDD:275368 5/19 (26%)
COG5048 229..649 CDD:227381 119/433 (27%)
C2H2 Zn finger 241..261 CDD:275368 2/26 (8%)
C2H2 Zn finger 269..289 CDD:275368 4/19 (21%)
C2H2 Zn finger 297..317 CDD:275368 6/19 (32%)
C2H2 Zn finger 325..345 CDD:275368 4/19 (21%)
C2H2 Zn finger 353..373 CDD:275368 7/20 (35%)
C2H2 Zn finger 381..401 CDD:275368 6/19 (32%)
C2H2 Zn finger 409..429 CDD:275368 5/19 (26%)
C2H2 Zn finger 437..457 CDD:275368 5/19 (26%)
C2H2 Zn finger 465..485 CDD:275368 5/20 (25%)
C2H2 Zn finger 493..513 CDD:275368 4/19 (21%)
C2H2 Zn finger 521..541 CDD:275368 5/19 (26%)
C2H2 Zn finger 549..569 CDD:275368 7/20 (35%)
C2H2 Zn finger 577..597 CDD:275368 1/19 (5%)
C2H2 Zn finger 605..625 CDD:275368 6/19 (32%)
C2H2 Zn finger 633..653 CDD:275368 2/13 (15%)
C2H2 Zn finger 661..681 CDD:275368
CTCFNP_648109.1 23ISL <116..206 CDD:293226 14/90 (16%)
C2H2 Zn finger 296..316 CDD:275368 6/19 (32%)
COG5048 321..>621 CDD:227381 99/319 (31%)
zf-C2H2 322..344 CDD:278523 4/21 (19%)
C2H2 Zn finger 324..344 CDD:275368 4/19 (21%)
zf-H2C2_2 337..361 CDD:290200 9/23 (39%)
C2H2 Zn finger 352..373 CDD:275368 7/20 (35%)
C2H2 Zn finger 381..401 CDD:275368 6/19 (32%)
zf-H2C2_2 394..415 CDD:290200 12/20 (60%)
C2H2 Zn finger 409..429 CDD:275368 5/19 (26%)
zf-H2C2_2 422..446 CDD:290200 12/23 (52%)
C2H2 Zn finger 437..457 CDD:275368 5/19 (26%)
C2H2 Zn finger 467..485 CDD:275368 5/17 (29%)
C2H2 Zn finger 496..516 CDD:275370 4/19 (21%)
C2H2 Zn finger 524..544 CDD:275368 5/19 (26%)
zf-H2C2_2 536..561 CDD:290200 11/24 (46%)
C2H2 Zn finger 552..573 CDD:275368 7/20 (35%)
zf-C2H2 587..609 CDD:278523 6/21 (29%)
C2H2 Zn finger 589..609 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
00.000

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