DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ZNF18 and gl

DIOPT Version :10

Sequence 1:NP_653281.2 Gene:ZNF18 / 7566 HGNCID:12969 Length:549 Species:Homo sapiens
Sequence 2:NP_001262708.1 Gene:gl / 42210 FlyBaseID:FBgn0004618 Length:679 Species:Drosophila melanogaster


Alignment Length:259 Identity:85/259 - (32%)
Similarity:126/259 - (48%) Gaps:36/259 - (13%)


- Green bases have known domain annotations that are detailed below.


Human   308 LLHASCQASGEVPSQASLRGFFTED--EPGCFGEGENLPEALQNIQDEGTGEQLSPQERISEKQL 370
            :|:....:.|..|:.|:..  ||.|  .|...|.|...|..:        ||:.||....:....
  Fly   325 VLYPPLLSPGHYPASATYS--FTADFRAPAPTGLGALPPLTV--------GEKESPSPPANSSLA 379

Human   371 G--------QHLPNPHSGE---------MSTMWLEEKRETSQ-----KGQPRAPMAQKLPTCREC 413
            |        |....||...         :|....|::.::::     :|.....|...|  ||.|
  Fly   380 GYYPTGVGNQGYTPPHKSPTSYQAAALGLSLSAFEDEEDSNEDLDGDEGSSGGEMKPNL--CRLC 442

Human   414 GKTFYRNSQLIFHQRTHTGETYFQCTICKKAFLRSSDFVKHQRTHTGEKPCKCDYCGKGFSDFSG 478
            |||:.|.|.|..|.|||:||..::|..|.|:|.::::...|.|||||:||.:|..|.:.||..|.
  Fly   443 GKTYARPSTLKTHLRTHSGERPYRCPDCNKSFSQAANLTAHVRTHTGQKPFRCPICDRRFSQSSS 507

Human   479 LRHHEKIHTGEKPYKCPICEKSFIQRSNFNRHQRVHTGEKPYKCSHCGKSFSWSSSLDKHQRSH 542
            :..|.:.|:||:||:|..|:|||...|...:|.|:|:|||||:|..|...||.|.:|::|.|.|
  Fly   508 VTTHMRTHSGERPYRCSSCKKSFSDSSTLTKHLRIHSGEKPYQCKLCLLRFSQSGNLNRHMRVH 571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZNF18NP_653281.2 SCAN 37..148 CDD:128708
KRAB 222..270 CDD:214630
zf-C2H2 409..430 CDD:395048 11/20 (55%)
C2H2 Zn finger 410..430 CDD:275368 11/19 (58%)
COG5048 <436..549 CDD:227381 46/107 (43%)
C2H2 Zn finger 438..458 CDD:275368 6/19 (32%)
C2H2 Zn finger 466..486 CDD:275368 6/19 (32%)
zf-H2C2_2 482..503 CDD:463886 11/20 (55%)
C2H2 Zn finger 494..514 CDD:275368 8/19 (42%)
zf-H2C2_2 506..530 CDD:463886 10/23 (43%)
C2H2 Zn finger 522..542 CDD:275368 8/19 (42%)
glNP_001262708.1 COG5048 <426..571 CDD:227381 63/146 (43%)
C2H2 Zn finger 439..459 CDD:275368 11/19 (58%)
C2H2 Zn finger 467..487 CDD:275368 6/19 (32%)
C2H2 Zn finger 495..515 CDD:275368 6/19 (32%)
C2H2 Zn finger 523..543 CDD:275368 8/19 (42%)
C2H2 Zn finger 551..571 CDD:275368 8/19 (42%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.