DRSC/TRiP Functional Genomics Resources

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Protein Alignment ZNF18 and CG17802

DIOPT Version :9

Sequence 1:NP_001290210.1 Gene:ZNF18 / 7566 HGNCID:12969 Length:549 Species:Homo sapiens
Sequence 2:NP_650659.2 Gene:CG17802 / 42143 FlyBaseID:FBgn0038549 Length:439 Species:Drosophila melanogaster


Alignment Length:398 Identity:89/398 - (22%)
Similarity:153/398 - (38%) Gaps:103/398 - (25%)


- Green bases have known domain annotations that are detailed below.


Human   202 LEERLIRDQDLGASLLPAAPQEQWRQLDSTQKEQYWDLMLET--------------YGKMVSGAG 252
            ::.|.:..:|.|....|.:...:..:::..:.||  :::.|.              |.|....:.
  Fly    76 IQRRSVEAKDDGCWADPLSDAHEGLKINDAEVEQ--EVLYEVSYADNEGLEEDHDLYKKEEEESE 138

Human   253 ISHPK--SDLTNSIEFGEELAGIYLHVNEKIPRPTCIGDRQENDKENLNLENHRDQELLHASCQA 315
            ::..|  .|:...|.|.:|                  .|.||..:|   .|:..|::..|...:.
  Fly   139 VNENKEFEDIACEIPFSKE------------------DDEQEQQQE---YEDMVDKKTGHDDGEE 182

Human   316 SGEVPSQASLRGFFTEDEPGCFGEGENLPEALQNIQDEGTGEQLSPQERISEKQLGQHLPNPHSG 380
            |.|.          .|.:|       :..|:.||.:||...::       .:.:|.|:.......
  Fly   183 SQEC----------EESQP-------DEEESQQNEEDEEESQE-------DDDELWQNEDGDSDT 223

Human   381 EMSTM----------WLEE----KRETSQKGQP---------------RAPMAQKLPTCRECGKT 416
            :..:|          .|:|    :|:.:::..|               :..::||:..|..|||.
  Fly   224 DADSMSDIEATSRQSALDEDKKPRRKYTKRSSPKNDDTDFLKPAKKKRKTYISQKVHICDHCGKK 288

Human   417 FYRNSQLIFHQRTHTGETYFQCTIC-KKAFLRSSDFVKHQRTHTGEKPCKCDYCGKGF-SDFSGL 479
            |........|...|:|...|:|..| :|.|.|....:..:..|.||||..|.:|.:.| ......
  Fly   289 FTDKGNFNLHVLRHSGVKPFECPECGQKEFNRYILNIHIRVKHRGEKPYACQFCDERFVHSTMRS 353

Human   480 RHHEKIHTGEKP---YKCPICEKSFIQRSNFNR--HQRVHTGEKPYKCSHCGKSFSWSSSLDKHQ 539
            ||..::|..:|.   :||..|:|.:  .||:.|  |:.|||||:.:.|..|..||:.:|:|..|.
  Fly   354 RHENRVHRNKKTPKNFKCNYCDKRY--ESNYQRAKHEVVHTGERNFHCEVCKVSFTRNSNLKTHY 416

Human   540 RS--HLGK 545
            ||  |..|
  Fly   417 RSRQHQNK 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZNF18NP_001290210.1 SCAN 37..148 CDD:322011
KRAB <222..249 CDD:307490 5/40 (13%)
C2H2 Zn finger 410..430 CDD:275368 6/19 (32%)
COG5048 <436..549 CDD:227381 42/119 (35%)
C2H2 Zn finger 438..458 CDD:275368 5/20 (25%)
C2H2 Zn finger 466..486 CDD:275368 5/20 (25%)
zf-H2C2_2 479..503 CDD:316026 8/26 (31%)
C2H2 Zn finger 494..514 CDD:275368 7/21 (33%)
zf-H2C2_2 506..530 CDD:316026 11/25 (44%)
C2H2 Zn finger 522..542 CDD:275368 9/21 (43%)
CG17802NP_650659.2 zf-AD 4..74 CDD:285071
C2H2 Zn finger 282..302 CDD:275368 6/19 (32%)
C2H2 Zn finger 310..331 CDD:275368 5/20 (25%)
C2H2 Zn finger 339..360 CDD:275368 5/20 (25%)
C2H2 Zn finger 371..388 CDD:275370 6/18 (33%)
zf-met 398..421 CDD:289631 9/22 (41%)
C2H2 Zn finger 399..417 CDD:275368 7/17 (41%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 123 1.000 Inparanoid score I4733
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.960

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