DRSC/TRiP Functional Genomics Resources

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Protein Alignment ZNF708 and trem

DIOPT Version :9

Sequence 1:XP_016882693.1 Gene:ZNF708 / 7562 HGNCID:12945 Length:587 Species:Homo sapiens
Sequence 2:NP_650861.1 Gene:trem / 42392 FlyBaseID:FBgn0038767 Length:439 Species:Drosophila melanogaster


Alignment Length:196 Identity:78/196 - (39%)
Similarity:108/196 - (55%) Gaps:17/196 - (8%)


- Green bases have known domain annotations that are detailed below.


Human   247 TGEKLYKCEECGK---AFNRSS---NLTKHKIVHTGEKP------YKCEECGKAFKQSSNLTNHK 299
            |..|..||:..|:   |::::|   ...|.|:   |.||      |.|:.||..:...:.||.|.
  Fly   230 THAKPEKCDRSGRKPVAYHKNSPKVETFKKKV---GRKPRNKLSTYICDVCGNIYPTQARLTEHM 291

Human   300 KIHTGEKPYKCGECGKAFTLSSHLTTHKRIHTGEKPYKCEECGKAFSVFSTLTKHKIIHTEEKPY 364
            |.|:|.||::|..||:.|..:..|..|...|||.:||||..|..||:..||.|||..|||:|:||
  Fly   292 KFHSGVKPHECEICGRGFVQNQQLVRHMNTHTGNRPYKCNYCPAAFADRSTKTKHHRIHTKERPY 356

Human   365 KCEECGKAFNRSSHLTNHKVIHTGEKPYKCEECGKAFTKSSTLTYHKVIHTGKKPYK--CEECGK 427
            .|:.|.:.|..|.:|..||:|||||||:.|:.|||.|.|:..|..|:..|..:..::  .||..|
  Fly   357 VCDVCSRTFTYSDNLKFHKMIHTGEKPHVCDLCGKGFVKAYKLRLHRETHNRRITWRNDAEESTK 421

Human   428 A 428
            |
  Fly   422 A 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZNF708XP_016882693.1 None
tremNP_650861.1 zf-AD 11..87 CDD:214871
COG5048 <264..411 CDD:227381 64/146 (44%)
C2H2 Zn finger 274..294 CDD:275368 7/19 (37%)
zf-H2C2_2 287..311 CDD:290200 12/23 (52%)
C2H2 Zn finger 302..322 CDD:275368 6/19 (32%)
zf-H2C2_2 315..338 CDD:290200 11/22 (50%)
C2H2 Zn finger 330..350 CDD:275368 9/19 (47%)
zf-H2C2_2 345..367 CDD:290200 11/21 (52%)
C2H2 Zn finger 358..378 CDD:275368 7/19 (37%)
zf-H2C2_2 370..394 CDD:290200 14/23 (61%)
C2H2 Zn finger 386..406 CDD:275368 8/19 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
00.000

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