DRSC/TRiP Functional Genomics Resources

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Protein Alignment CNBP and GIS2

DIOPT Version :10

Sequence 1:NP_001120664.1 Gene:CNBP / 7555 HGNCID:13164 Length:179 Species:Homo sapiens
Sequence 2:NP_014144.1 Gene:GIS2 / 855466 SGDID:S000005199 Length:153 Species:Saccharomyces cerevisiae


Alignment Length:187 Identity:60/187 - (32%)
Similarity:89/187 - (47%) Gaps:51/187 - (27%)


- Green bases have known domain annotations that are detailed below.


Human     1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHLAK 65
            ||...|:.||:.||.|.:|                  .|:|           :||.|.:.||:..
Yeast     1 MSQKACYVCGKIGHLAEDC------------------DSER-----------LCYNCNKPGHVQT 36

Human    66 DCDLQEDVE--ACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC------DHADEQKCY 122
            ||.:...||  .|||||..||:..:|      ..|.|:||.:.||::|:|      ....:..||
Yeast    37 DCTMPRTVEFKQCYNCGETGHVRSEC------TVQRCFNCNQTGHISRECPEPKKTSRFSKVSCY 95

Human   123 SCGEFGHIQKDCTK------VKCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 173
            .||...|:.|||.|      :|||.||:.||::.:|.  ::..||.|.|:||::::|
Yeast    96 KCGGPNHMAKDCMKEDGISGLKCYTCGQAGHMSRDCQ--NDRLCYNCNETGHISKDC 150

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CNBPNP_001120664.1 RNA-binding Arg/Gly-rich region (RGG-box). /evidence=ECO:0000269|PubMed:28329689 25..38 0/12 (0%)
PTZ00368 54..173 CDD:173561 48/132 (36%)
GIS2NP_014144.1 AIR1 <1..129 CDD:227414 52/162 (32%)

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