DRSC/TRiP Functional Genomics Resources

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Protein Alignment CNBP and Cnbp

DIOPT Version :10

Sequence 1:NP_001120664.1 Gene:CNBP / 7555 HGNCID:13164 Length:179 Species:Homo sapiens
Sequence 2:XP_017448367.1 Gene:Cnbp / 64530 RGDID:621807 Length:178 Species:Rattus norvegicus


Alignment Length:179 Identity:178/179 - (99%)
Similarity:178/179 - (99%) Gaps:1/179 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHLAK 65
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat     1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHLAK 65

Human    66 DCDLQEDVEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHI 130
            ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat    66 DCDLQED-EACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHI 129

Human   131 QKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA 179
            |||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   130 QKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CNBPNP_001120664.1 RNA-binding Arg/Gly-rich region (RGG-box). /evidence=ECO:0000269|PubMed:28329689 25..38 12/12 (100%)
PTZ00368 54..173 CDD:173561 117/118 (99%)
CnbpXP_017448367.1 PTZ00368 54..172 CDD:173561 117/118 (99%)

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