DRSC/TRiP Functional Genomics Resources

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Protein Alignment CNBP and cnbp

DIOPT Version :10

Sequence 1:NP_001120664.1 Gene:CNBP / 7555 HGNCID:13164 Length:179 Species:Homo sapiens
Sequence 2:XP_031755848.1 Gene:cnbp / 448166 XenbaseID:XB-GENE-919590 Length:177 Species:Xenopus tropicalis


Alignment Length:179 Identity:169/179 - (94%)
Similarity:174/179 - (97%) Gaps:2/179 - (1%)


- Green bases have known domain annotations that are detailed below.


Human     1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHLAK 65
            |||||||||||:||||||||||||||||.|.||||||:|.|||||:|||||||||||||||||||
 Frog     1 MSSNECFKCGRTGHWARECPTGGGRGRGGRGRGRGGFSSSRGFQFISSSLPDICYRCGESGHLAK 65

Human    66 DCDLQEDVEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHI 130
            |||||||  ||||||||||||||||||::||||||||||||||||||||||||||||||||||||
 Frog    66 DCDLQED--ACYNCGRGGHIAKDCKEPRKEREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHI 128

Human   131 QKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA 179
            |||||||||||||||||||||||||||||||||||||||||||||||||
 Frog   129 QKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CNBPNP_001120664.1 RNA-binding Arg/Gly-rich region (RGG-box). /evidence=ECO:0000269|PubMed:28329689 25..38 10/12 (83%)
PTZ00368 54..173 CDD:173561 114/118 (97%)
cnbpXP_031755848.1 PTZ00368 <6..89 CDD:173561 76/84 (90%)
PTZ00368 54..171 CDD:173561 114/118 (97%)

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