DRSC/TRiP Functional Genomics Resources

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Protein Alignment CNBP and yps

DIOPT Version :10

Sequence 1:NP_001120664.1 Gene:CNBP / 7555 HGNCID:13164 Length:179 Species:Homo sapiens
Sequence 2:NP_524033.2 Gene:yps / 39377 FlyBaseID:FBgn0022959 Length:352 Species:Drosophila melanogaster


Alignment Length:17 Identity:8/17 - (47%)
Similarity:8/17 - (47%) Gaps:0/17 - (0%)


- Green bases have known domain annotations that are detailed below.


Human    20 PTGGGRGRGMRSRGRGG 36
            |.|..||.|...|..||
  Fly   260 PEGLQRGEGQGPRRGGG 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CNBPNP_001120664.1 RNA-binding Arg/Gly-rich region (RGG-box). /evidence=ECO:0000269|PubMed:28329689 25..38 6/12 (50%)
PTZ00368 54..173 CDD:173561
ypsNP_524033.2 CSD 62..131 CDD:278729
Blue background indicates that the domain is not in the aligned region.

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