DRSC/TRiP Functional Genomics Resources

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Protein Alignment CNBP and CNBP

DIOPT Version :10

Sequence 1:NP_001120664.1 Gene:CNBP / 7555 HGNCID:13164 Length:179 Species:Homo sapiens
Sequence 2:NP_611739.1 Gene:CNBP / 37646 FlyBaseID:FBgn0034802 Length:165 Species:Drosophila melanogaster


Alignment Length:183 Identity:70/183 - (38%)
Similarity:90/183 - (49%) Gaps:40/183 - (21%)


- Green bases have known domain annotations that are detailed below.


Human     3 SNECFKCGRSGHWARECPT------------GGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICY 55
            |..|:||.|.||:||:|..            |||.|.|||....||...:|          :.||
  Fly     4 SATCYKCNRPGHFARDCSLGGGGGPGGVGGGGGGGGGGMRGNDGGGMRRNR----------EKCY 58

Human    56 RCGESGHLAKDCDLQEDVEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQK 120
            :|.:.||.|:.|  .|:.|.||.|...|||:|||.:..   ...||.|.|.||..|:|..|..  
  Fly    59 KCNQFGHFARAC--PEEAERCYRCNGIGHISKDCTQAD---NPTCYRCNKTGHWVRNCPEAVN-- 116

Human   121 CYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 173
                      ::..|.|.||:|..|||::.||.:||: .||.||:||||.|||
  Fly   117 ----------ERGPTNVSCYKCNRTGHISKNCPETSK-TCYGCGKSGHLRREC 158

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CNBPNP_001120664.1 RNA-binding Arg/Gly-rich region (RGG-box). /evidence=ECO:0000269|PubMed:28329689 25..38 6/12 (50%)
PTZ00368 54..173 CDD:173561 48/118 (41%)
CNBPNP_611739.1 PTZ00368 6..161 CDD:173561 58/166 (35%)

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