DRSC/TRiP Functional Genomics Resources

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Protein Alignment CNBP and K08D12.3

DIOPT Version :10

Sequence 1:NP_001120664.1 Gene:CNBP / 7555 HGNCID:13164 Length:179 Species:Homo sapiens
Sequence 2:NP_741323.1 Gene:K08D12.3 / 176979 WormBaseID:WBGene00019537 Length:151 Species:Caenorhabditis elegans


Alignment Length:166 Identity:59/166 - (35%)
Similarity:77/166 - (46%) Gaps:52/166 - (31%)


- Green bases have known domain annotations that are detailed below.


Human     1 MSSNECFKCGRSGHWARECPTG---GGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGH 62
            ||...|:||.:.||.:|.||.|   ||| ||    |.||.|               ||.|.|:||
 Worm     1 MSDRNCYKCQQPGHISRNCPNGESDGGR-RG----GGGGST---------------CYNCQETGH 45

Human    63 LAKDCDLQED----------VEACYNCGRGGHIAKDCKEPKRE----------------REQCCY 101
            .::||.....          ..:|||||..||.::||...:.|                ..|.||
 Worm    46 FSRDCPKGGSGGGQRGGGGGGGSCYNCGGRGHYSRDCPSARSEGGSGGYGGRGGEGRSFGGQKCY 110

Human   102 NCGKPGHLARDCDH---ADEQKCYSCGEFGHIQKDC 134
            |||:.||::|:|..   |:|::||.|.|.|||.:||
 Worm   111 NCGRSGHISRECTESGSAEEKRCYQCQETGHISRDC 146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CNBPNP_001120664.1 RNA-binding Arg/Gly-rich region (RGG-box). /evidence=ECO:0000269|PubMed:28329689 25..38 6/12 (50%)
PTZ00368 54..173 CDD:173561 39/110 (35%)
K08D12.3NP_741323.1 PTZ00368 1..148 CDD:173561 59/166 (36%)

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