DRSC/TRiP Functional Genomics Resources

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Protein Alignment ZIC3 and SWI5

DIOPT Version :10

Sequence 1:NP_003404.1 Gene:ZIC3 / 7547 HGNCID:12874 Length:467 Species:Homo sapiens
Sequence 2:NP_010430.1 Gene:SWI5 / 851724 SGDID:S000002553 Length:709 Species:Saccharomyces cerevisiae


Alignment Length:349 Identity:76/349 - (21%)
Similarity:124/349 - (35%) Gaps:90/349 - (25%)


- Green bases have known domain annotations that are detailed below.


Human   164 GLHEQGAGHPSPTGHVDNNQVHLGLRGELFGRADPYRPV-----ASPRTDPYAAGAQFPNYSPMN 223
            |:...|...||||..|......:.:...:.|..:....|     :|...|.|....:..::|.::
Yeast   366 GIELLGKPGPSPTKSVSLKSASVDIMPTIPGSVNNTPSVNKVSLSSSYIDQYTPRGKQLHFSSIS 430

Human   224 MN-MGVNVAAHHGPGAFFRYMRQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHV 287
            .| :|:|.|..|        ::.|            :|.:|.::.   .|:.:...|.....::.
Yeast   431 ENALGINAATPH--------LKPP------------SQQARHREG---VFNDLDPNVLTKNTDNE 472

Human   288 GGPEQNNHV---CYWEECPREGKSFKAKYK--------LVNHIRVHTGEKP-------------- 327
            |...:.|..   ....|.|......::||:        .:..|..:|...|              
Yeast   473 GDDNEENEPESRFVISETPSPVLKSQSKYEGRSPQFGTHIKEINTYTTNSPSKITRKLTTLPRGS 537

Human   328 ------------FPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMH 380
                        |.|.||||.|.|.|..|::.|.:||..::|:.|:..|||:.|..:.|..:|..
Yeast   538 IDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDRPYSCDHPGCDKAFVRNHDLIRHKK 602

Human   381 VHTSDKPYICKVCDKSYTHPSSLRKHMKVHESQGSDSSPAASSG--YES---STPPAIASANSKD 440
            .| .:|.|.|. |.|.:....:|    .||.|:     ...|.|  ||:   ...|.......||
Yeast   603 SH-QEKAYACP-CGKKFNREDAL----VVHRSR-----MICSGGKKYENVVIKRSPRKRGRPRKD 656

Human   441 TTKTPSAVQTSTSHNPGLPPNFNE 464
            .|       :|.|.:| :..|.|:
Yeast   657 GT-------SSVSSSP-IKENINK 672

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZIC3NP_003404.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 66..107
zf_ZIC 245..290 CDD:436441 6/44 (14%)
Nuclear localization signal 297..322 5/32 (16%)
C2H2 Zn finger 302..322 CDD:275368 4/27 (15%)
SFP1 <324..408 CDD:227516 29/109 (27%)
C2H2 Zn finger 330..352 CDD:275368 10/21 (48%)
Nuclear localization signal 330..352 10/21 (48%)
C2H2 Zn finger 360..382 CDD:275368 7/21 (33%)
C2H2 Zn finger 390..410 CDD:275368 4/19 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 404..467 16/66 (24%)
SWI5NP_010430.1 COG5048 124..630 CDD:227381 63/297 (21%)
C2H2 Zn finger 552..574 CDD:275368 10/21 (48%)
C2H2 Zn finger 582..604 CDD:275368 7/21 (33%)
C2H2 Zn finger 611..627 CDD:275368 5/20 (25%)
Blue background indicates that the domain is not in the aligned region.

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