DRSC/TRiP Functional Genomics Resources

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Protein Alignment ZIC1 and sug

DIOPT Version :10

Sequence 1:NP_003403.2 Gene:ZIC1 / 7545 HGNCID:12872 Length:447 Species:Homo sapiens
Sequence 2:NP_610826.1 Gene:sug / 36424 FlyBaseID:FBgn0033782 Length:384 Species:Drosophila melanogaster


Alignment Length:373 Identity:117/373 - (31%)
Similarity:160/373 - (42%) Gaps:92/373 - (24%)


- Green bases have known domain annotations that are detailed below.


Human   117 QHSLFAASAGGFGGPHGHTDAAGHLLFPGLHEQAAGHASP-NVVNGQMRLGFSG----DMYPRPE 176
            |.|:|.:      |||..          |::|...|:.:| |..........||    |.:...:
  Fly     5 QKSIFNS------GPHSR----------GIYEPPLGYFTPYNTPPYIAAYSDSGSWLADHHQHHQ 53

Human   177 QYGQVTSPRSEHYAAP--------QLHGYG----PMNVNMAAHHGAGAFFRYMRQPIK------- 222
            |..|....:.:|...|        .:.|||    ..:|.|.|.   |......|.|::       
  Fly    54 QQHQQHQQQMQHIRFPTPPITPPRPIAGYGYRQRTQSVIMKAR---GQQDELCRSPVEFPDDSKS 115

Human   223 ----------QELICKWIEPEQLANPKKSCNKTFSTMHELVTHVTVEH-VGGPEQSNHICFWEEC 276
                      .:.:|.|.:          |::.|.|:..|..|||..| :.......:.|.|..|
  Fly   116 CSSSSECGTASDFVCNWTD----------CDRVFDTLDALAQHVTQRHAIASLTDGLYYCRWRGC 170

Human   277 PREGKPFKAKYKLVNHIRVHTGEKPFPCPFPGCGKVFARSENLKIHKRTHTGEKPFKCEFEGCDR 341
            .|..:.|.|:||::.|.|.||.|||..|..  |.|.|:|:||||||.|:|:||||:||.||||.:
  Fly   171 QRSERGFNARYKMLVHTRTHTKEKPHRCHL--CEKSFSRAENLKIHIRSHSGEKPYKCSFEGCQK 233

Human   342 RFANSSDRKKHMHVHTSDKPYLCKM--CDKSYTHPSSLRKHMKVHESSSQ--GSQP--------- 393
            .::|||||.||...|:.:|||:||:  |.|.||.|||||||:|..:.|..  .|||         
  Fly   234 AYSNSSDRFKHTRTHSMEKPYMCKVAGCQKRYTDPSSLRKHVKTFKHSIHLIASQPLTLPSVPCL 298

Human   394 -----------SPAASS--GYESSTPPTIVSPSTDNPTTSSLSPSSSA 428
                       .|||||  ...||:.......|.:.|:..||.|...|
  Fly   299 LEASSESAFTCLPAASSVESTSSSSSARYYDDSNNEPSDYSLKPKQDA 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZIC1NP_003403.2 zf_ZIC 219..264 CDD:436441 11/62 (18%)
C2H2 Zn finger 276..296 CDD:275368 8/19 (42%)
SFP1 <298..382 CDD:227516 50/85 (59%)
C2H2 Zn finger 304..326 CDD:275368 12/21 (57%)
C2H2 Zn finger 334..356 CDD:275368 12/21 (57%)
C2H2 Zn finger 364..384 CDD:275368 14/21 (67%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 375..431 24/78 (31%)
sugNP_610826.1 C2H2 Zn finger 170..190 CDD:275368 8/19 (42%)
COG5048 192..>271 CDD:227381 45/80 (56%)
C2H2 Zn finger 198..218 CDD:275368 12/21 (57%)
C2H2 Zn finger 226..248 CDD:275368 12/21 (57%)
C2H2 Zn finger 256..277 CDD:275368 13/20 (65%)

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