DRSC/TRiP Functional Genomics Resources

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Protein Alignment ZIC1 and jing

DIOPT Version :10

Sequence 1:NP_003403.2 Gene:ZIC1 / 7545 HGNCID:12872 Length:447 Species:Homo sapiens
Sequence 2:NP_001097200.1 Gene:jing / 35555 FlyBaseID:FBgn0086655 Length:1744 Species:Drosophila melanogaster


Alignment Length:382 Identity:75/382 - (19%)
Similarity:125/382 - (32%) Gaps:146/382 - (38%)


- Green bases have known domain annotations that are detailed below.


Human    22 HHSAGDVAERDVGLGINPFADGMGAFKLNPSSHELASAGQTAFTSQAPGYAAAAALGHHHHPGHV 86
            |....|:...:.|:|        |:...:.||:.:|.|..:...|..|...||::          
  Fly  1269 HKRLRDLPTPESGIG--------GSLSNSESSNSIADAISSKSASVGPPTTAASS---------- 1315

Human    87 GSYSSAAFNSTRDFLFRNRGFGDAAAAASAQHSLFAASAGGFGGPHGHTDAAGHLLFPGLHEQAA 151
                                   |:::||..:|| |::|.....|...:.|..    |.......
  Fly  1316 -----------------------ASSSASDSNSL-ASNAPSPASPEDCSAAPS----PACSASTT 1352

Human   152 GHASPNVVNGQMRLGFSGDMYPRPEQYGQVTSPRSEHYAAPQLHGYGPMNVNMAAHHGAGAFFRY 216
            |...|:.|.....:..:....|:......::.|::..:.|                 ||||..: 
  Fly  1353 GSIPPSTVVDIAMVEATSKSLPKSAISPILSQPKTIRFPA-----------------GAGASGK- 1399

Human   217 MRQPIKQELICKWIEPEQLANPKKSCNKTFSTMHELVTHVTVEHVGGPEQSNHICFWEECPREGK 281
                                                          |.::.:.:|:|::|   .|
  Fly  1400 ----------------------------------------------GGKRHDGVCYWDKC---NK 1415

Human   282 PFKAKYKLVNHIRVH---TGEKPFPCPFPGCGKVFARSEN----LKIHKRTHTGEKPFKCEFEGC 339
            ..::..||::|::.|   |...||.|.:.|| ||:.:...    |:.|..:|.|.|.|||..|||
  Fly  1416 KHESNSKLLDHMQTHHVNTQTGPFACLWVGC-KVYNKESCSRRWLERHVLSHGGSKQFKCIVEGC 1479

Human   340 DRRFANSSDRKKHMHVH--------------TSDKPYLCKMCDKSYTHPSSLRKHMK 382
            ..||.:....:||::.|              |||.|.           |..|||:.|
  Fly  1480 GLRFGSQLALQKHVNNHFNATDNARESTSKRTSDPPV-----------PKQLRKNGK 1525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZIC1NP_003403.2 zf_ZIC 219..264 CDD:436441 0/44 (0%)
C2H2 Zn finger 276..296 CDD:275368 5/19 (26%)
SFP1 <298..382 CDD:227516 31/101 (31%)
C2H2 Zn finger 304..326 CDD:275368 7/25 (28%)
C2H2 Zn finger 334..356 CDD:275368 8/21 (38%)
C2H2 Zn finger 364..384 CDD:275368 5/19 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 375..431 4/8 (50%)
jingNP_001097200.1 C2H2 Zn finger 1411..1430 CDD:275368 5/21 (24%)
C2H2 Zn finger 1441..1466 CDD:275368 7/25 (28%)
C2H2 Zn finger 1474..1496 CDD:275368 8/21 (38%)

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