DRSC/TRiP Functional Genomics Resources

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Protein Alignment YY1 and CG11902

DIOPT Version :10

Sequence 1:NP_003394.1 Gene:YY1 / 7528 HGNCID:12856 Length:414 Species:Homo sapiens
Sequence 2:NP_651389.3 Gene:CG11902 / 43070 FlyBaseID:FBgn0028647 Length:1426 Species:Drosophila melanogaster


Alignment Length:253 Identity:70/253 - (27%)
Similarity:108/253 - (42%) Gaps:50/253 - (19%)


- Green bases have known domain annotations that are detailed below.


Human   208 KQVQIKTLEGEFSVT------MWSSDEKKDIDHETV-VEEQIIGENSPPDYSEYMTGKKLPPGGI 265
            |:.|.:..|.:|..|      ||.|:....:|.:.| .|:|.:.|:......|..|..::...|:
  Fly  1162 KRTQCENREKQFKCTRCGYKFMWESNLLLHMDLQHVKTEDQELDESKEASGDEPKTEGQVFQCGL 1226

Human   266 PGIDLSDPKQLAEFAR------MKPRKIKEDD------APRTIACP------------------H 300
            .....:...:|....:      .||...|..:      .|:...|.                  |
  Fly  1227 CTRKYNRKDRLTAHLKKFHGPDCKPSTAKTPNRPISPKEPKRFLCAFCGKAVSSSSNLIIHMRRH 1291

Human   301 KG--------CTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT 356
            .|        ||..|..:|.::.|..|| |.|.|||..|.|.|..|.||::|..:|:||:|::||
  Fly  1292 TGEKPFKCEYCTMAFPRSSDLQCHRRTHTGERPHVCTVCQKGFARSYKLQQHMRIHSGERPYKCT 1356

Human   357 FEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ 414
            :  |.|.|:...:|..|:|.|||:|||.|..  |.::|.|.|.||:|.:..:..:..|
  Fly  1357 Y--CEKSFTQSNDLTLHIRRHTGERPYQCGV--CGERFIQGTALKNHRMQQSHYEEGQ 1410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
YY1NP_003394.1 Interaction with the SMAD1/SMAD4 complex. /evidence=ECO:0000269|PubMed:15329343 1..170
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 33..81
Gly-rich region involved in interaction with HCFC1. /evidence=ECO:0000269|PubMed:20805357 116..260 15/58 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 157..203
Involved in nuclear matrix association. /evidence=ECO:0000269|PubMed:9493912 257..341 26/122 (21%)
COG5048 <268..407 CDD:227381 53/177 (30%)
Binding to DNA. /evidence=ECO:0000269|PubMed:18950698 295..414 48/145 (33%)
C2H2 Zn finger 298..320 CDD:275368 8/47 (17%)
C2H2 Zn finger 327..347 CDD:275368 8/19 (42%)
Involved in repression of activated transcription 333..371 14/37 (38%)
C2H2 Zn finger 355..377 CDD:275368 8/21 (38%)
Involved in masking transactivation domain 371..397 11/25 (44%)
C2H2 Zn finger 385..407 CDD:275368 8/21 (38%)
CG11902NP_651389.3 zf-AD 6..83 CDD:462262
C2H2 Zn finger 208..228 CDD:275370
C2H2 Zn finger 236..256 CDD:275370
C2H2 Zn finger 384..405 CDD:275368
C2H2 Zn finger 417..437 CDD:275368
C2H2 Zn finger 447..463 CDD:275368
C2H2 Zn finger 578..599 CDD:275368
C2H2 Zn finger 610..629 CDD:275368
C2H2 Zn finger 640..660 CDD:275368
SUF4-like 673..>726 CDD:411020
C2H2 Zn finger 676..703 CDD:411020
C2H2 Zn finger 676..696 CDD:275368
C2H2 Zn finger 706..726 CDD:411020
C2H2 Zn finger 706..726 CDD:275368
C2H2 Zn finger 762..782 CDD:275368
C2H2 Zn finger 866..887 CDD:275368
C2H2 Zn finger 896..918 CDD:275368
C2H2 Zn finger 926..947 CDD:275368
C2H2 Zn finger 967..987 CDD:275368
C2H2 Zn finger 996..1016 CDD:275368
C2H2 Zn finger 1044..1063 CDD:275368
C2H2 Zn finger 1224..1244 CDD:275368 2/19 (11%)
C2H2 Zn finger 1271..1291 CDD:275368 1/19 (5%)
zf-H2C2_2 1283..1306 CDD:463886 4/22 (18%)
C2H2 Zn finger 1299..1319 CDD:275368 5/19 (26%)
C2H2 Zn finger 1327..1347 CDD:275368 8/19 (42%)
zf-H2C2_2 1340..1364 CDD:463886 11/25 (44%)
SFP1 <1349..1405 CDD:227516 25/59 (42%)
C2H2 Zn finger 1355..1375 CDD:275368 8/21 (38%)
C2H2 Zn finger 1383..1401 CDD:275368 8/19 (42%)
Blue background indicates that the domain is not in the aligned region.

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