DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment WRN and SGS1

DIOPT Version :10

Sequence 1:NP_000544.2 Gene:WRN / 7486 HGNCID:12791 Length:1432 Species:Homo sapiens
Sequence 2:NP_013915.1 Gene:SGS1 / 855228 SGDID:S000004802 Length:1447 Species:Saccharomyces cerevisiae


Alignment Length:1447 Identity:358/1447 - (24%)
Similarity:580/1447 - (40%) Gaps:364/1447 - (25%)


- Green bases have known domain annotations that are detailed below.


Human    66 SEDISMSLSDGDVVGFDMEWPPLYNRGKLGKV----ALIQLCVSES-----KCYLFHVSSMS--- 118
            |.:.:.|:.|...:|..:|     |..||..:    :||.....:|     ||.:...:|:|   
Yeast   153 SRNNNKSVIDNSSIGKQLE-----NDIKLEVIRLQGSLIMALKEQSKLLLQKCSIIESTSLSEDA 212

Human   119 --------VFPQGLKM-----LLENKAVKKAGVGIEGDQWKLLRDFDIKLKNFVELTDVANKKLK 170
                    :.||...|     .||.:.:|....|:..||        .|.::.|...|       
Yeast   213 KRLQLSRDIRPQLSNMSIRIDSLEKEIIKAKKDGMSKDQ--------SKGRSQVSSQD------- 262

Human   171 CTETWSLNSLVKHLLGKQLLKDKSIRCSNWSKFPLTEDQKLYAATDAYAGFIIYRN--------- 226
                   ::::..:|...|..:.|.|.||.:....|...|..|.|.|...  |..|         
Yeast   263 -------DNIISSILPSPLEYNTSSRNSNLTSTTATTVTKALAITGAKQN--ITNNTGKNSNNDS 318

Human   227 -----LEILDDTVQRFAINKEEEILL------SDMNKQLTSISEEVMDLAKHLPHAFSKLENPRR 280
                 :::|||...   |:.:..::|      |.....|...|||..:|.:.     ..:.:...
Yeast   319 NNDDLIQVLDDEDD---IDCDPPVILKEGAPHSPAFPHLHMTSEEQDELTRR-----RNMRSREP 375

Human   281 VSILLKDISENLYSLRRMIIGST------NIETELRPSNNLNLLSFEDS-----TTGGVQQKQIR 334
            |:..:.|..:..    ..::|.:      ::|   |..:.|.:.:.:|:     ||   :.::..
Yeast   376 VNYRIPDRDDPF----DYVMGKSLRDDYPDVE---REEDELTMEAEDDAHSSYMTT---RDEEKE 430

Human   335 EHEVLIH-----VEDETWDPTLDHLAKHDGEDVLGNKVERKEDGFEDGVEDNKLKENMERACLMS 394
            |:|:|..     |.::..|||.| ...||..||..|..|..::|  |......|.:|.....::|
Yeast   431 ENELLNQSDFDFVVNDDLDPTQD-TDYHDNMDVSANIQESSQEG--DTRSTITLSQNKNVQVILS 492

Human   395 -------------------LDITEHELQ---ILE--------QQSQEEYLSDI----AYKSTEHL 425
                               :|:.|.:|:   ||:        :|......||:    :.|..|..
Yeast   493 SPTAQSVPSNGQNQIGVEHIDLLEDDLEKDAILDDSMSFSFGRQHMPMSHSDLELIDSEKENEDF 557

Human   426 SPNDNENDTSYVIESDEDLEMEMLKHLSPNDNENDTSYVIESDEDLEMEMLKSLENLNSGTVEPT 490
            ..::|.|...|:  ||.|||    :.....:|....:.:.|.|.||::...:.|...|.   .|.
Yeast   558 EEDNNNNGIEYL--SDSDLE----RFDEERENRTQVADIQELDNDLKIITERKLTGDNE---HPP 613

Human   491 HSKCLKMERNLGLPTKEEEEDD----------ENEANEGEEDDDKDFLWPAPNEEQVTCLKMYFG 545
            .|...|::|.....::::||||          .:::|...:.:...:.|   ::|.:..|...|.
Yeast   614 PSWSPKIKREKSSVSQKDEEDDFDDDFSLSDIVSKSNLSSKTNGPTYPW---SDEVLYRLHEVFK 675

Human   546 HSSFKPVQWKVIHSVLEERRDNVAVMATGYGKSLCFQYPPVYVGKIG------LVISPLISLMED 604
            ...|:|.|.:.:::.| :.:|...:|.||.|||||:|.|.|.  |.|      :|||||||||:|
Yeast   676 LPGFRPNQLEAVNATL-QGKDVFVLMPTGGGKSLCYQLPAVV--KSGKTHGTTIVISPLISLMQD 737

Human   605 QVLQLKMSNIPACFLGS-------AQSENVLTDIKLGKYRIVYVTPEYCSGN---MGLLQQLEAD 659
            ||..|...||.|....|       .|:.|:..:   |...:||::||..|.:   ...:.:|.||
Yeast   738 QVEHLLNKNIKASMFSSRGTAEQRRQTFNLFIN---GLLDLVYISPEMISASEQCKRAISRLYAD 799

Human   660 IGITLIAVDEAHCISEWGHDFRDSFRKLGSLKTALPMVPIVALTATASSSIREDIVRCLNLRNPQ 724
            ..:..|.||||||:|.||||||..:::|...|...|.:|::|||||||..:|.||:..|.|:.|.
Yeast   800 GKLARIVVDEAHCVSNWGHDFRPDYKELKFFKREYPDIPMIALTATASEQVRMDIIHNLELKEPV 864

Human   725 ITCTGFDRPNLYLEVRRKTGNILQDLQPFLVKTSSHWEFEGPT-IIYCPSRKMTQQVTGELRKLN 788
            .....|:|.|||.||.:||.|.:     |.:..:....|:..| ||||.|:|..:|.:.::::..
Yeast   865 FLKQSFNRTNLYYEVNKKTKNTI-----FEICDAVKSRFKNQTGIIYCHSKKSCEQTSAQMQRNG 924

Human   789 LSCGTYHAGMSFSTRKDIHHRFVRDEIQCVIATIAFGMGINKADIRQVIHYGAPKDMESYYQEIG 853
            :.|..|||||....|..:...:..||||.:.||:||||||:|.|:|.|.|:..|:.:|.||||.|
Yeast   925 IKCAYYHAGMEPDERLSVQKAWQADEIQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQETG 989

Human   854 RAGRDGLQSSCHVLWAPADINLNRHLLTEIRNEK--FRLYKLKMMAKMEKYL----HSSRCRRQI 912
            ||||||..|.|...::..||   |.:.|.|:.:|  .|..|.|.:.|:::.:    :.:.|||::
Yeast   990 RAGRDGNYSYCITYFSFRDI---RTMQTMIQKDKNLDRENKEKHLNKLQQVMAYCDNVTDCRRKL 1051

Human   913 ILSHFEDKQVQKASLGIMGTEKCCDNCRSRLDHCYSMDDSEDTSWDFGPQAFKLLSAVD-ILGEK 976
            :||:|.:....|.      ..|.|||||:..:   .:::..|.:    ..|.|::..|: |..|:
Yeast  1052 VLSYFNEDFDSKL------CHKNCDNCRNSAN---VINEERDVT----EPAKKIVKLVESIQNER 1103

Human   977 FGIGLPILF----LRGSNSQRLA----DQYRRHSLFGTGKDQTESWWKAFSRQLITEGFLVEVSR 1033
                :.|::    .:||.|.::.    |....|   |.||...:|..:.....|||...|.|.|.
Yeast  1104 ----VTIIYCQDVFKGSRSSKIVQANHDTLEEH---GIGKSMQKSEIERIFFHLITIRVLQEYSI 1161

Human  1034 YN------KFMKICALTKK---GRNWLHKANT-------ESQSLILQANEELCPKKLLLPSSKTV 1082
            .|      .::|:....||   |:..:....|       .|.|...||||:..|  ::...|.|:
Yeast  1162 MNNSGFASSYVKVGPNAKKLLTGKMEIKMQFTISAPNSRPSTSSSFQANEDNIP--VIAQKSTTI 1224

Human  1083 SS----------GTKEHCYNQVPVELSTEKKSNLEKLYSYKPCDKISSGSNISKKSIMVQSPEKA 1137
            ..          ..|||.                 :.|:|       .||.:             
Yeast  1225 GGNVAANPPRFISAKEHL-----------------RSYTY-------GGSTM------------- 1252

Human  1138 YSSSQPVI--------SAQEQETQIVLYGKLVEARQKHANKMDVPPAILATNKILVDMAKMRPT- 1193
             .||.|:.        |.||.....:.|.:|.|......|:|..|......:.||..||.:.|. 
Yeast  1253 -GSSHPITLKNTSDLRSTQELNNLRMTYERLRELSLNLGNRMVPPVGNFMPDSILKKMAAILPMN 1316

Human  1194 --------TVENVKRIDGVSEGKAAMLAPLLEVIKHFCQTNSVQTDLFSSTKPQEEQKTSLVAKN 1250
                    |||:..|                   :.|....:...||......::.:|...:..:
Yeast  1317 DSAFATLGTVEDKYR-------------------RRFKYFKATIADLSKKRSSEDHEKYDTILND 1362

Human  1251 KICTLSQSMAITYSLFQEKKMPLKSIAESRILPLMTIGMHLSQAVKAGCPLDLERAGLTPEVQKI 1315
            :....:.:.:             ..||:|........|.:|::|               .|.::|
Yeast  1363 EFVNRAAASS-------------NGIAQSTGTKSKFFGANLNEA---------------KENEQI 1399

Human  1316 IADVIRNP-PVNSDMSK 1331
            |..:.::. |.|:..||
Yeast  1400 INQIRQSQLPKNTTSSK 1416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
WRNNP_000544.2 Interaction with WRNIP1. /evidence=ECO:0000250|UniProtKB:O09053 2..277 51/255 (20%)
KBM 1. /evidence=ECO:0000305|PubMed:27063109 11..23
RNaseD_like 61..229 CDD:176650 40/201 (20%)
PTZ00341 <156..480 CDD:173534 77/393 (20%)
2 X 27 AA tandem repeats of H-L-S-P-N-D-N-E-N-D-T-S-Y-V-I-E-S-D-E-D-L-E-M-E-M-L-K 424..477 13/52 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 498..529 6/40 (15%)
recQ_fam 538..1010 CDD:129701 176/503 (35%)
DEAH box. /evidence=ECO:0000255|PROSITE-ProRule:PRU00541 668..671 2/2 (100%)
Interaction with DNA. /evidence=ECO:0000269|PubMed:20159463 987..993 3/5 (60%)
HRDC 1156..1229 CDD:128635 16/81 (20%)
HTH_40 1258..1352 CDD:464189 13/75 (17%)
KBM 2. /evidence=ECO:0000305|PubMed:27063109 1403..1412
XLM. /evidence=ECO:0000305|PubMed:27063109 1419..1432
SGS1NP_013915.1 RecQ 670..1151 CDD:440280 177/514 (34%)
Helicase_Sgs1 1271..1350 CDD:463270 19/97 (20%)
Blue background indicates that the domain is not in the aligned region.

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