DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment WRN and wrn

DIOPT Version :10

Sequence 1:NP_000544.2 Gene:WRN / 7486 HGNCID:12791 Length:1432 Species:Homo sapiens
Sequence 2:XP_012810306.2 Gene:wrn / 734043 XenbaseID:XB-GENE-992875 Length:1433 Species:Xenopus tropicalis


Alignment Length:1498 Identity:761/1498 - (50%)
Similarity:999/1498 - (66%) Gaps:142/1498 - (9%)


- Green bases have known domain annotations that are detailed below.


Human     9 TAQQRKCPEWMNVQNKRCAVEERKACV-RKSVFEDDLPFLEFTGSIVYSYDASDCSFLSEDISMS 72
            |:.|||.||||:||.|..:::::|..: :|::.||:||:|:|.|||||||:.:|||.|||||..|
 Frog     2 TSLQRKLPEWMSVQQKEDSIDDKKKSLWKKNIVEDNLPYLKFNGSIVYSYEGNDCSLLSEDIRSS 66

Human    73 LSDGDVVGFDMEWPPLYNRGKLGKVALIQLCVSESKCYLFHVSSMSVFPQGLKMLLENKAVKKAG 137
            |.:.||:|||:||||:|.:||.|||||||:||||.||||||:|.|:.||:||:.|||:::|||.|
 Frog    67 LQEEDVLGFDIEWPPIYTKGKTGKVALIQVCVSEKKCYLFHISPMAGFPKGLRRLLEDESVKKVG 131

Human   138 VGIEGDQWKLLRDFDIKLKNFVELTDVANKKLKCTETWSLNSLVKHLLGKQLLKDKSIRCSNWSK 202
            ||||||||||:.|:::|||.|:||::|||:||:|.|.||||.|||||..||||||.|||||||..
 Frog   132 VGIEGDQWKLMSDYELKLKGFIELSEVANQKLRCKEKWSLNGLVKHLFKKQLLKDSSIRCSNWDI 196

Human   203 FPLTEDQKLYAATDAYAGFIIYRNLEILD--DTVQRFAINKEEEILLSDMNKQLTSISEEVMDLA 265
            |||:.|||||||:|||||.:||:.||.:|  :.|. |.:::........:.:|||.:|...|||.
 Frog   197 FPLSTDQKLYAASDAYAGLLIYQKLECMDAHEKVS-FCVSRVGVADFEGIKRQLTDLSNGFMDLV 260

Human   266 KHLPHAFSKLENPRRVSILLKDISENLYSLRRMIIGSTNIETELRPSNNLNLLSFED-STTGGVQ 329
            |.:|.:|.......|...:|:|:||.|..||.::..::..|     .|.|.....|| |.....|
 Frog   261 KDVPSSFGHSTGALRAVAILEDLSEKLEELRSIVKEASKGE-----GNGLLCHDSEDCSEEDKYQ 320

Human   330 QKQIREHEVLIHVEDETWDPTLDHLAKHDGEDVLGNKVERKEDGFEDGVEDNKLKENMERACLMS 394
            ...:...|:|.       :..:|:           ...|.|.:...|..::..:|::.       
 Frog   321 SINLASKELLA-------ENKIDY-----------KNAESKNNKDVDCCQNENMKQDF------- 360

Human   395 LDITEHELQILEQQSQEEYLSDIAYKSTEHLSPNDNENDTSYVIESDEDLEMEMLKHLSPNDNEN 459
            |.|:|.||.::|::..|:.:.. ..||.|||...:.|.:.||:|||||:.|.|::|.|...||  
 Frog   361 LGISEEELYMMERKDDEKQIKP-GQKSNEHLYDTNEEKNMSYIIESDEEFESEIIKSLEDLDN-- 422

Human   460 DTSYVIESDEDLEMEMLKSLENLNSGTVEPTHSKCLKMERNLGL-PTKEEEEDDENEANEG--EE 521
                              |:|.....:|..|           || |.|..:...:.|.:||  ||
 Frog   423 ------------------SIEEAIGTSVHQT-----------GLIPAKSVDTVADEEEDEGIEEE 458

Human   522 DDDKDFLW----PAPNEEQVTCLKMYFGHSSFKPVQWKVIHSVLEERRDNVAVMATGYGKSLCFQ 582
            |||.|  |    |.||.|||:|||.|||||||||||||||||||.|||||:.|||||||||||:|
 Frog   459 DDDDD--WDPSIPEPNAEQVSCLKTYFGHSSFKPVQWKVIHSVLRERRDNLVVMATGYGKSLCYQ 521

Human   583 YPPVYVGKIGLVISPLISLMEDQVLQLKMSNIPACFLGSAQSENVLTDIKLGKYRIVYVTPEYCS 647
            :.|||...||:||.|||||||||||||:|||||:||||||||:|||.|:|.|:.|::|:|||:||
 Frog   522 FAPVYTSGIGIVICPLISLMEDQVLQLEMSNIPSCFLGSAQSKNVLQDVKAGRMRVIYMTPEFCS 586

Human   648 GNMGLLQQLEADIGITLIAVDEAHCISEWGHDFRDSFRKLGSLKTALPMVPIVALTATASSSIRE 712
            |.:.|||.|:...||||||:||||||||||||||.::|.|||||..||.|||||||||||.||||
 Frog   587 GGISLLQDLDNRYGITLIAIDEAHCISEWGHDFRSAYRSLGSLKRMLPTVPIVALTATASPSIRE 651

Human   713 DIVRCLNLRNPQITCTGFDRPNLYLEVRRKTGNILQDLQPFLV-KTSSHWEFEGPTIIYCPSRKM 776
            ||.:.|:|.|||||||.||||||||:|.:||.||..|||.||: |..|.|||||.||:|||:||.
 Frog   652 DISKSLSLHNPQITCTSFDRPNLYLDVAKKTTNISTDLQQFLIKKQGSGWEFEGATIVYCPTRKT 716

Human   777 TQQVTGELRKLNLSCGTYHAGMSFSTRKDIHHRFVRDEIQCVIATIAFGMGINKADIRQVIHYGA 841
            ::|||.||.||.::||||||||....|:|:||||:|||||||:||:||||||||.|||:||||||
 Frog   717 SEQVTAELTKLGIACGTYHAGMGIKQRRDVHHRFMRDEIQCVVATVAFGMGINKPDIRKVIHYGA 781

Human   842 PKDMESYYQEIGRAGRDGLQSSCHVLWAPADINLNRHLLTEIRNEKFRLYKLKMMAKMEKYLHSS 906
            ||:||||||||||||||||.|.||.||..||||.|||:|.||.|..||.|||||:.||||||:||
 Frog   782 PKEMESYYQEIGRAGRDGLPSCCHALWTQADINFNRHMLGEIPNNSFREYKLKMLTKMEKYLNSS 846

Human   907 RCRRQIILSHFEDKQVQKASLGIMGTEKCCDNCRSRLDHCYSMDDSEDTSWDFGPQAFKLLSAVD 971
            .|||:||||||||||::|||.||||||||||||::||....|::|:||...:||.||:|.:||||
 Frog   847 NCRRKIILSHFEDKQLRKASSGIMGTEKCCDNCKTRLRFNISINDTEDNLQEFGQQAYKFISAVD 911

Human   972 ILGEKFGIGLPILFLRGSNSQRLADQYRRHSLFGTGKDQTESWWKAFSRQLITEGFLVEVSRYNK 1036
            |||:|||.|:|:||||||.||||.|::|.|.||..||||||::||..:||||:||:|.|.|.:.|
 Frog   912 ILGQKFGTGVPVLFLRGSTSQRLPDRFRHHPLFSCGKDQTEAFWKVLARQLISEGYLQESSGHTK 976

Human  1037 FMKICALTKKGRNWLHKA-NTESQSLILQANEELCPKKLL-------LPSSKTVSSGTKEHCYNQ 1093
            |..||.||.||.|||.|| |.:..||:|.:|:|||.::..       :||..::......:..:.
 Frog   977 FSTICGLTSKGTNWLMKASNQQHPSLLLPSNDELCLRRTTVSNSISRVPSHSSMIPHASPNTRSS 1041

Human  1094 VPVELSTEKKSNLEKLYSYKPCDKISSGSNISK-KSIMVQSPEKAYSSSQPVISAQEQETQIVLY 1157
            :| :...||.|..|| :||:...|:|:..::|| .|:.:|:|.|...:::|.:|.:|.|.|..||
 Frog  1042 IP-KAGPEKISLKEK-FSYQEAGKLSTAVDVSKSSSLKLQTPCKPLQAAEPDVSPKEMELQTALY 1104

Human  1158 GKLVEARQKHANKMDVPPAILATNKILVDMAKMRPTTVENVKRIDGVSEGKAAMLAPLLEVIKHF 1222
            |:||.||||.|::.|:|||:|||||:||||||:||||:||:|::|||||.|:||||||:||:|.|
 Frog  1105 GRLVVARQKIASERDIPPAVLATNKVLVDMAKLRPTTIENMKKLDGVSEAKSAMLAPLVEVVKEF 1169

Human  1223 CQTNSVQTDLFSSTKPQEEQKTSLVAKNKICTLSQSMAITYSLFQEKKMPLKSIAESRILPLMTI 1287
            |..||::.|:||.:..|.|..:|...:....||.:|..::||||||:.:.||.:|::|.|.:..:
 Frog  1170 CIANSLKMDIFSRSGSQSELTSSTQREQDSTTLPESQRMSYSLFQEQNLSLKKVADARCLSMAAV 1234

Human  1288 GMHLSQAVKAGCPLDLERAGLTPEVQKIIADVIRNPPVNSDMSKISLIRMLVPENIDTYLIHMAI 1352
            ||||.||:|||..:|::||||||.::|:|.|.|:|||:|||:|....||..:|.|||:|||.|||
 Frog  1235 GMHLWQALKAGYSVDVQRAGLTPGIRKLIIDNIKNPPINSDLSSFKAIRESIPANIDSYLIRMAI 1299

Human  1353 EILKHGPDSGLQPSCD---------------------------------VNKRRCFPGSEEICSS 1384
            .:|:....:|.|...|                                 :.|:...|.:.|:..:
 Frog  1300 ALLEKEESNGAQGQLDLPTQKTLVKLEEQPKNISVENIKHKATMNNSLWIEKKPTQPTTAELEET 1364

Human  1385 SKR-----------------SKEEVGINTETSSAERKRRLPVWF--AKG-SDTSKKLMDKT-KRG 1428
            ..:                 ..||:...:::.:...||:||.||  ||| :.|:.....|| |:.
 Frog  1365 KAKPLAPIMLASWNEPSLDADTEELFSESQSYTTTPKRKLPQWFGPAKGNAGTNAVKKAKTGKKK 1429

Human  1429 GLF 1431
            |:|
 Frog  1430 GIF 1432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
WRNNP_000544.2 Interaction with WRNIP1. /evidence=ECO:0000250|UniProtKB:O09053 2..277 156/270 (58%)
KBM 1. /evidence=ECO:0000305|PubMed:27063109 11..23 8/11 (73%)
RNaseD_like 61..229 CDD:176650 116/167 (69%)
PTZ00341 <156..480 CDD:173534 114/326 (35%)
2 X 27 AA tandem repeats of H-L-S-P-N-D-N-E-N-D-T-S-Y-V-I-E-S-D-E-D-L-E-M-E-M-L-K 424..477 16/52 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 498..529 13/33 (39%)
recQ_fam 538..1010 CDD:129701 340/472 (72%)
DEAH box. /evidence=ECO:0000255|PROSITE-ProRule:PRU00541 668..671 2/2 (100%)
Interaction with DNA. /evidence=ECO:0000269|PubMed:20159463 987..993 4/5 (80%)
HRDC 1156..1229 CDD:128635 51/72 (71%)
HTH_40 1258..1352 CDD:464189 49/93 (53%)
KBM 2. /evidence=ECO:0000305|PubMed:27063109 1403..1412 6/10 (60%)
XLM. /evidence=ECO:0000305|PubMed:27063109 1419..1432 5/14 (36%)
wrnXP_012810306.2 WRN_exo 55..222 CDD:176653 115/166 (69%)
recQ_fam 477..950 CDD:129701 340/472 (72%)
HRDC 1098..1176 CDD:128635 53/77 (69%)
HTH_40 1205..1299 CDD:464189 49/93 (53%)

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