DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CORO2A and coro

DIOPT Version :10

Sequence 1:NP_003380.3 Gene:CORO2A / 7464 HGNCID:2255 Length:525 Species:Homo sapiens
Sequence 2:NP_001260743.1 Gene:coro / 35596 FlyBaseID:FBgn0265935 Length:535 Species:Drosophila melanogaster


Alignment Length:511 Identity:207/511 - (40%)
Similarity:317/511 - (62%) Gaps:34/511 - (6%)


- Green bases have known domain annotations that are detailed below.


Human     8 RSSKFRHVFGKPASKENCYDSVPITRSVHDNHFCAVNPHFIAVVTECAGGGAFLVIPLHQTGKLD 72
            ||||||||:|:...:|.|||::.:::|..|:.||||||.|:|::.|.||||||:|:|.::.|::.
  Fly     7 RSSKFRHVYGQALKREQCYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFIVLPHNKVGRIA 71

Human    73 PHYPKVCGHRGNVLDVKWNPFDDFEIASCSEDATIKIWSIPKQLLTRNLTAYRKELVGHARRVGL 137
            ..:|.|.||:|.|||:.|.|.:|..|||.|||..:|:|.||...|:|.||....:||.|.|||||
  Fly    72 ADHPLVGGHKGPVLDIAWCPHNDNVIASGSEDCVVKVWQIPDGGLSRTLTEPVVDLVFHQRRVGL 136

Human   138 VEWHPTAANILFSAGYDYKVMIWNLDTKESVITSPMSTISCHQDVILSMSFNTNGSLLATTCKDR 202
            |.|||:|.|:|.:||.|.:|:|||:.|.|.::     .|..|.|::.|..||.:||.|.|||||:
  Fly   137 VLWHPSALNVLLTAGSDNQVVIWNVGTGEILV-----HIDSHPDIVYSACFNWDGSKLVTTCKDK 196

Human   203 KIRVIDPRAGTVLQEA-SYKGHRASKVLFLGNLKKLMSTGTSRWNNRQVALWDQDNLSVPLMEED 266
            |||:.|||...:..|| .::|.:|::.:||.: ..:.:||.:|.:.||.:|...|.|:.|::..:
  Fly   197 KIRIYDPRTAELESEAMCHEGSKATRAIFLRH-GLIFTTGFNRSSERQYSLRAPDALNEPIVMVE 260

Human   267 LDGSSGVLFPFYDADTSMLYVVGKGDGNIRYYEVSADKPHLSYLTEYRSYNPQKGIGVMPKRGLD 331
            ||.|:||:||.|||||:|:|:.||||..|||:||:.:.|.:.|:..:::..||:|||:|||||.|
  Fly   261 LDTSNGVMFPLYDADTNMIYLCGKGDSVIRYFEVTPEPPFVHYINTFQTTEPQRGIGLMPKRGCD 325

Human   332 VSSCEIFRFYKLITTKSLIEPISMIVPRRSESYQEDIYPPTAGAQPSLTAQEWLSGMNRDPILVS 396
            |::||:.:||:: ....|.:.|||.|||:|:.:|||:||.|.....::||:||:.|.:.|||..|
  Fly   326 VTTCEVAKFYRM-NNNGLCQVISMTVPRKSDLFQEDLYPDTLAEDAAITAEEWIDGKDADPITFS 389

Human   397 LRPGSELLRPHPLPAERPIFNSMAPA--SPRLLNQTEKLAAEDGWRSSSLLEEKMPRWAAEHRLE 459
            |:....:::...:.:.   .|...||  :..:||:....:|..|..|||         |......
  Fly   390 LKDRVSIVQGGYVSSS---VNKSLPAKKAGNILNKPRGDSASSGATSSS---------AGGGNFA 442

Human   460 EKKTWLTNGFDVFECPPPK---TENELLQMFYRQQEEIRRLRELLTQREVQAKQLE 512
            .     .|..:..|..||.   :|.:|..:    |:|||:|:.::.::|.:.:.||
  Fly   443 S-----GNNNEASEGGPPAAVLSEKDLRTI----QDEIRKLKAIIVKQENRIRALE 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CORO2ANP_003380.3 WD40 10..518 CDD:475233 205/509 (40%)
WD 1 24..71 23/46 (50%)
WD40 repeat 40..80 CDD:293791 20/39 (51%)
WD 2 72..122 23/49 (47%)
WD40 repeat 86..130 CDD:293791 20/43 (47%)
WD repeat 130..170 22/39 (56%)
WD40 repeat 135..170 CDD:293791 19/34 (56%)
WD 4 171..214 20/42 (48%)
WD40 repeat 184..219 CDD:293791 19/35 (54%)
WD repeat 220..263 13/42 (31%)
WD40 repeat 225..266 CDD:293791 12/40 (30%)
WD repeat 269..308 22/38 (58%)
WD40 repeat 273..312 CDD:293791 21/38 (55%)
coroNP_001260743.1 WD40 9..>392 CDD:475233 180/389 (46%)
WD40 repeat 37..78 CDD:293791 19/40 (48%)
WD40 repeat 85..129 CDD:293791 20/43 (47%)
WD40 repeat 134..171 CDD:293791 19/41 (46%)
WD40 repeat 178..213 CDD:293791 18/34 (53%)
WD40 repeat 220..260 CDD:293791 12/40 (30%)
WD40 repeat 267..308 CDD:293791 21/40 (53%)

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