DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TRPV1 and nan

DIOPT Version :10

Sequence 1:NP_061197.4 Gene:TRPV1 / 7442 HGNCID:12716 Length:839 Species:Homo sapiens
Sequence 2:NP_001261833.1 Gene:nan / 39571 FlyBaseID:FBgn0036414 Length:834 Species:Drosophila melanogaster


Alignment Length:798 Identity:190/798 - (23%)
Similarity:303/798 - (37%) Gaps:248/798 - (31%)


- Green bases have known domain annotations that are detailed below.


Human    71 DSCPTITVSPVITIQRPGDGPTGARLLSQDSVAASTEKTLRLYDRRSIFEAVAQNNCQDLESLLL 135
            |.||.::.:..|:      .||..|.:..|           |..|.::.|.:..         |.
  Fly   108 DYCPEVSEAEYIS------NPTAYRFVCWD-----------LNMRGAVGETILH---------LC 146

Human   136 FLQKSKKHLTDNEFKDPETGKTCLLKAMLNLHDGQNTTIPLLLEIARQTDSLKELVNASYTDSYY 200
            .|..|..|..             |.|.:|..:.      .|:|:|              |....|
  Fly   147 LLNASSLHAD-------------LAKRLLKFYP------KLILDI--------------YMSDEY 178

Human   201 KGQTALHIAIERRNMALVTLLVENGADVQAAAHGDF-------FKKT-------------KGRPG 245
            .|::.|||||...:.|:|..|::..||||....|.|       |.:|             ....|
  Fly   179 YGESVLHIAIVNEDPAMVKYLLDANADVQERCCGAFMSAEDTKFSRTDSPDHEYVALCPMTNYDG 243

Human   246 F-YFGELPLSLAACTNQLGIVKFLLQNSWQTADISARDSVGNTVLHALVEVADNTADNTKFVTSM 309
            : |:||.|||.|||.:|....:.:|...   ||...:|:.||||||.||               :
  Fly   244 YVYWGEYPLSFAACLSQEECFRLVLARG---ADPDFQDTNGNTVLHMLV---------------I 290

Human   310 YNEILM------LGAKLHPTLKLEELTNKKGMTPLALAAGTGKIGVLAYI--LQREIQEPECRHL 366
            |.:|.|      :|..:|       :.|.:.:|||.|||..|::.:..::  ::|||.       
  Fly   291 YEKIEMFDVGYEVGTNIH-------IKNIQNLTPLTLAAKLGRVEMFFHVMSIEREIY------- 341

Human   367 SRKFTEWAYGPVHSSLYDLSCIDT-------CEKNSVLEVIAYSSSETPNRHDMLLVEPLNRLLQ 424
                  |..|.:..:.|.|..|||       ..|:|||..:.:...   ..|..||...:..||:
  Fly   342 ------WQLGSITCAAYPLLMIDTINEETGNINKDSVLNFVVFGDK---LEHLELLDGVVIDLLK 397

Human   425 DKWDRFVKRIFYFNFLVYCLYMII----------------------------------------- 448
            .|||.|.|..||..|.::.||.:|                                         
  Fly   398 TKWDTFCKSRFYKQFYMFALYFLISLFSFILRPGPDAKDEDEDGANSTTAKSDLYRQNGSDSYHL 462

Human   449 ---------------FTMAAYYRP--VDGLPPF----------KMEKTGDYFRVTGEILSVLGGV 486
                           .....||.|  |:.||.:          .:|......|:..|:|:.:|.:
  Fly   463 HSKRATMTTEYKTFWLNFTEYYDPSEVEVLPAWWESYAQCPLMNLESDLAKLRIMAELLNFVGAI 527

Human   487 YFF--------FRGIQYFLQRRPSMKTLFVDSYSEMLFFLQSLFMLATVVLYFSHLKE---YVAS 540
            .:.        |.|::.|::.       .:.:.|.::|......|:....|..|.|.|   :|..
  Fly   528 LYLLVALREARFLGLKMFIEN-------LMTAPSRVMFLFSCALMMTIPWLRVSCLTEIDDHVTV 585

Human   541 MVFSLALGWTNMLYYTRGFQQMGIYAVMIEKMILRDLCRFMFVYIVFLFGFSTAVVTLIEDGKND 605
            ::......:  .|::.|||:.:|.:.|||.:|::.||.||:.:|:||:.|||.|...:.....|.
  Fly   586 VIMLTTAPY--FLFFCRGFKTVGPFVVMIYRMVMGDLLRFVSIYLVFVMGFSQAFYIIFLTFDNP 648

Human   606 SLPSESTSHRWRGPACRPPDSSYNSLYSTCL-ELFKFTIGMGDLEFTEN-YDFKAVFIILLLAYV 668
            |.|.:..:.      ..|..|...|:.:..| .|..|....|.:..|:: |:.|.:|.:    ::
  Fly   649 SSPEDQDAE------SNPMPSPMESIVAMFLMSLTNFGDYYGAMVSTQHEYEAKILFFL----FM 703

Human   669 ILTYILLLNMLIALMGETVNKIAQESKNIWKLQRAITILDTEKSFLKCMR-KAF----------R 722
            ::..:||:|||||:||.|..||| |.:|.|:.|.|..:|..|:|.....| |.|          |
  Fly   704 VIVSVLLVNMLIAMMGNTYQKIA-EIRNEWQRQWARIVLVVERSVPPAERLKNFMQYSQSMSDGR 767

Human   723 SGKLLQVGYTPDGKDDYR 740
            ...:|::..|.:.|::.:
  Fly   768 RALVLRLNMTEEEKEEMK 785

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TRPV1NP_061197.4 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..58
TRPV1 109..761 CDD:411980 182/760 (24%)
ANK 1. /evidence=ECO:0000269|PubMed:37117175, ECO:0007744|PDB:8GF8, ECO:0007744|PDB:8GF9, ECO:0007744|PDB:8GFA 111..139 5/27 (19%)
ANK 2. /evidence=ECO:0000269|PubMed:37117175, ECO:0007744|PDB:8GF8, ECO:0007744|PDB:8GF9, ECO:0007744|PDB:8GFA 154..186 6/31 (19%)
ANK repeat 155..197 CDD:293786 7/41 (17%)
ANK repeat 202..232 CDD:293786 13/29 (45%)
ANK 3. /evidence=ECO:0000269|PubMed:37117175, ECO:0007744|PDB:8GF8, ECO:0007744|PDB:8GF9, ECO:0007744|PDB:8GFA 204..229 10/24 (42%)
ANK repeat 248..282 CDD:293786 12/33 (36%)
ANK 4. /evidence=ECO:0000269|PubMed:37117175, ECO:0007744|PDB:8GF8, ECO:0007744|PDB:8GF9, ECO:0007744|PDB:8GFA 250..277 9/26 (35%)
ANK repeat 284..321 CDD:293786 12/42 (29%)
ANK 5. /evidence=ECO:0000269|PubMed:37117175, ECO:0007744|PDB:8GF8, ECO:0007744|PDB:8GF9, ECO:0007744|PDB:8GFA 286..322 11/41 (27%)
ANK 6. /evidence=ECO:0000269|PubMed:37117175, ECO:0007744|PDB:8GF8, ECO:0007744|PDB:8GF9, ECO:0007744|PDB:8GFA 336..359 9/24 (38%)
ANK 7. /evidence=ECO:0000269|PubMed:37117175, ECO:0007744|PDB:8GF8, ECO:0007744|PDB:8GF9, ECO:0007744|PDB:8GFA 394..416 5/21 (24%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:O35433 644..647 0/2 (0%)
AD. /evidence=ECO:0000250|UniProtKB:O35433 685..713 11/27 (41%)
Interaction with calmodulin. /evidence=ECO:0000250|UniProtKB:O35433 768..802
Required for PIP2-mediated channel inhibition. /evidence=ECO:0000250|UniProtKB:O35433 778..793
nanNP_001261833.1 TRPV 131..748 CDD:454755 176/730 (24%)
ANK repeat 138..174 CDD:293786 11/77 (14%)
ANK repeat 179..229 CDD:293786 17/49 (35%)
ANK repeat 231..278 CDD:293786 14/49 (29%)
ANK repeat 280..311 CDD:293786 13/52 (25%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.