| Sequence 1: | NP_003374.3 | Gene: | VLDLR / 7436 | HGNCID: | 12698 | Length: | 873 | Species: | Homo sapiens |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_610911.1 | Gene: | CG6553 / 36537 | FlyBaseID: | FBgn0033880 | Length: | 319 | Species: | Drosophila melanogaster |
| Alignment Length: | 300 | Identity: | 82/300 - (27%) |
|---|---|---|---|
| Similarity: | 112/300 - (37%) | Gaps: | 99/300 - (33%) |
- Green bases have known domain annotations that are detailed below.
|
Human 245 QCGSGECIHKKWRCDGDPDCKDGSDE--VNCPSRTCRPDQFECEDGSCIHGSRQCNGIRDCVDGS 307
Human 308 DE-----------VNCKNVNQCLGPGKFKCRSGECIDISKVCNQEQDCRDWSDE----------- 350
Human 351 ---------------------------------PLK---EC-----------HINECLVNNGGCS 368
Human 369 HICKDLVIGYECDCAAGFELIDRKTCGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGV 433
Human 434 -CKAVGKEPSLIFTNRRD--IRKIGLERKEYIQLVEQLRN 470 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| VLDLR | NP_003374.3 | LDLa | 33..67 | CDD:238060 | |
| LDLa | 71..103 | CDD:197566 | |||
| Ldl_recept_a | 111..149 | CDD:395011 | |||
| LDLa | 154..188 | CDD:238060 | |||
| Ldl_recept_a | 192..224 | CDD:395011 | |||
| Ldl_recept_a | 237..273 | CDD:395011 | 14/29 (48%) | ||
| Ldl_recept_a | 276..312 | CDD:395011 | 16/46 (35%) | ||
| Ldl_recept_a | 320..350 | CDD:395011 | 11/29 (38%) | ||
| FXa_inhibition | 360..394 | CDD:464251 | 8/33 (24%) | ||
| EGF_CA | 396..426 | CDD:214542 | 7/29 (24%) | ||
| Ldl_recept_b | 481..522 | CDD:459654 | |||
| LY | 505..547 | CDD:214531 | |||
| Ldl_recept_b | 568..608 | CDD:459654 | |||
| LY | 592..634 | CDD:214531 | |||
| Ldl_recept_b | 655..695 | CDD:459654 | |||
| FXa_inhibition | 706..749 | CDD:464251 | |||
| CG6553 | NP_610911.1 | LDLa | 34..60 | CDD:197566 | 12/24 (50%) |
| LDLa | 70..101 | CDD:197566 | 14/30 (47%) | ||
| LDLa | 115..146 | CDD:197566 | 13/37 (35%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||