DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rnf145 and sip3

DIOPT Version :10

Sequence 1:NP_083138.2 Gene:Rnf145 / 74315 MGIID:1921565 Length:663 Species:Mus musculus
Sequence 2:NP_651894.3 Gene:sip3 / 43747 FlyBaseID:FBgn0039875 Length:626 Species:Drosophila melanogaster


Alignment Length:453 Identity:106/453 - (23%)
Similarity:176/453 - (38%) Gaps:108/453 - (23%)


- Green bases have known domain annotations that are detailed below.


Mouse   229 VLFMVFWLV--LFALQIYSYFSTRDQPASRERLLFLFLTSIAECCSTPYSLLGLVFTV------- 284
            |:::.|:::  :|...:...|....:.|..|.||..|..::.|.|        |.|||       
  Fly    43 VIYIQFFVIVFMFGKLLSKIFLGTLRAAEFEHLLERFWYALTETC--------LAFTVFRDDFNP 99

Mouse   285 SFVALGVLTLCKFYLQGYRAFMNDPAMNRGMTEGVTLLILAVQTGLIELQVVHRAFLLSIILFIV 349
            .||||..:.|   :|:.:.....:                       .:..:.|:.:|..:..|.
  Fly   100 RFVALFTVLL---FLKSFHWLAEE-----------------------RVDFMERSPVLGWLFHIR 138

Mouse   350 VASILQSMLEIADPIVLALGASRDKSLWKHFRAVSLCLFLLVFPAYMAYMI----CQF-FHMDFW 409
            |.|:| ::|.|.|                         ::|:..||.:.::    .|. |..::.
  Fly   139 VGSLL-TVLGILD-------------------------YVLLIHAYNSTLVRGPTVQLVFGFEYA 177

Mouse   410 LLIIISSSILTSLQVLGTLFIYVLFMVEEFRKEPVENMDDVIYYVNGTYRLLEFVVALC-VVAYG 473
            :|:.:.:|         |...|||...|.....|.||....:.|.       |.|:.|. ||.|.
  Fly   178 ILLTVIAS---------TAIKYVLHAAEMRTDTPWENKAVFLLYT-------ELVIGLIKVVLYI 226

Mouse   474 VSETIFGEWTVMGSMIIFIHSYYNVW-LRAQLGWKSFLLRRDAVNKIKSL-PVATQEQLEKHNDI 536
            :...|..:...: .|.:|...::.:. .|..|  ...::.|.|:..:.:| |.||.|:|.:.::|
  Fly   227 LFVVIMAKIYAL-PMFVFRPMFFTIRNFRKAL--NDVIMSRRAIRNMNTLYPDATPEELRQSDNI 288

Mouse   537 CAICYQDM-KSAVITPCSHFFHAGCLKKWLYVQDTCPLCHCHL-----KNSSQLPGLGTEAAPQP 595
            |.||.:|| ..:...||.|.||..||:.|...|.|||.|..::     .||:.:|..|.||.   
  Fly   289 CIICREDMVNHSKKLPCGHIFHTTCLRSWFQRQQTCPTCRLNILRTPTVNSTAMPRQGDEAV--- 350

Mouse   596 PAGAEQNIVLQEGPEPPDHESPPG-TGTQEGSGDSSE-HINRGSASQEGAADA-GEGPQIPEG 655
            .|.|...|....|.:|.....||. |...:|:...:: ::..|.|.....||. |:...:|.|
  Fly   351 AAAAGNPIPAAAGVQPAGGVPPPAPTAVVDGNQARADVNVAGGQALPPNFADLFGDASGLPNG 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rnf145NP_083138.2 TRC8_N 8..506 CDD:463960 57/292 (20%)
YLYF motif. /evidence=ECO:0000269|PubMed:29374057 81..84
HRD1 <520..627 CDD:227568 40/114 (35%)
RING-H2_RNF145 533..575 CDD:319598 18/42 (43%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 587..663 19/72 (26%)
sip3NP_651894.3 HRD1 20..>365 CDD:227568 94/403 (23%)
Blue background indicates that the domain is not in the aligned region.

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