| Sequence 1: | NP_003371.2 | Gene: | VIM / 7431 | HGNCID: | 12692 | Length: | 466 | Species: | Homo sapiens |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_508160.1 | Gene: | ifd-2 / 180430 | WormBaseID: | WBGene00002058 | Length: | 443 | Species: | Caenorhabditis elegans |
| Alignment Length: | 474 | Identity: | 99/474 - (20%) |
|---|---|---|---|
| Similarity: | 190/474 - (40%) | Gaps: | 120/474 - (25%) |
- Green bases have known domain annotations that are detailed below.
|
Human 13 RMFGGPGTASRPSSSRSYVTTSTRTYSLGSALRPSTSRSLYASSPGGVYATRSSAVRLRSSVPGV 77
Human 78 RLLQDSVDFSLADAINTEFKNTRTNEKVELQELNDRFANYIDKVRFLEQQNKILLAELEQLKGQG 142
Human 143 ---KSRLGDLYEEEMRELRRQVDQLTNDKARVEVERDN---LAEDIMRLREKLQEEMLQREEAEN 201
Human 202 TLQSFRQ-----DVDNASLARL--DLERKVESLQEEIAFL----KKLH--------------EEE 241
Human 242 IQELQAQIQEQHVQIDVDVSKP--------------DLTAALRDVRQQYESVAAKNLQEAEEWYK 292
Human 293 SKFADLSEAANRNNDALRQAKQESTEYRRQVQSLTCEVDALKGTNESLERQMREM----EENFAV 353
Human 354 EAANYQDTIGRLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLPLPNF 418
Human 419 SSLNLRETNLDSLPLVDTH 437 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| VIM | NP_003371.2 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..32 | 5/18 (28%) | |
| Head | 2..95 | 13/81 (16%) | |||
| Filament_head | 14..101 | CDD:368088 | 12/86 (14%) | ||
| Coil 1A | 96..131 | 18/34 (53%) | |||
| Filament | 102..410 | CDD:365827 | 79/356 (22%) | ||
| Linker 1 | 132..153 | 2/23 (9%) | |||
| Coil 1B | 154..245 | 21/118 (18%) | |||
| Linker 12 | 246..268 | 5/35 (14%) | |||
| Coil 2 | 269..407 | 28/141 (20%) | |||
| [IL]-x-C-x-x-[DE] motif. /evidence=ECO:0000305|PubMed:25417112 | 326..329 | 0/2 (0%) | |||
| Tail | 408..466 | 7/30 (23%) | |||
| ifd-2 | NP_508160.1 | Filament | 55..402 | CDD:278467 | 78/353 (22%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 1 | 1.000 | 181 | 1.000 | Domainoid score | I2296 |
| eggNOG | 1 | 0.900 | - | - | E1_KOG0977 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 1 | 1.000 | - | - | X62 | |
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 5 | 4.810 | |||||