DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment VIL1 and qua

DIOPT Version :10

Sequence 1:NP_009058.2 Gene:VIL1 / 7429 HGNCID:12690 Length:827 Species:Homo sapiens
Sequence 2:NP_001246066.1 Gene:qua / 35058 FlyBaseID:FBgn0003187 Length:892 Species:Drosophila melanogaster


Alignment Length:905 Identity:245/905 - (27%)
Similarity:402/905 - (44%) Gaps:148/905 - (16%)


- Green bases have known domain annotations that are detailed below.


Human    21 IWRIEAMQMVPVPSSTFGSFFDGDCYIILAI--------HKTAS-------SLSYDIHYWIGQDS 70
            ||:|:..::..|..|.:|:|:|...|||.|.        |:|.:       ||...||||:|::.
  Fly    38 IWKIDEDRLEAVQRSHYGTFYDSCAYIIYAASLSGHYANHETITREQKPNVSLERYIHYWLGKNV 102

Human    71 SLDEQGAAAIYTTQMDDFLKGRAVQHREVQGNESEAFRGYFKQG----LVIRKGGVASGMKHVET 131
            |...:........::|.:|...:..:||.|..||..|..|||:|    ..:|.|.:.|..:.   
  Fly   103 SEQNRSNVVHKIQELDSYLGNISSIYRETQNLESARFLSYFKKGYEFRFSVRSGALISAPQR--- 164

Human   132 NSYDVQRLLHVKGKRNVVAGEV-EMSWKSFNRGDVFLLDLGKLIIQWNGPESTRMERLRGMTLAK 195
                 .||..:..::.:.:.|| .:.|..||...|.:|....|...|.|..|:.:||...:...:
  Fly   165 -----PRLFQLYARKWLRSIEVATIDWSHFNSDYVMVLQTDNLTYVWIGRSSSGIERRSALDWVQ 224

Human   196 EIRDQERGGRTYVGVVDGENELASPKLMEVMNHVLGKRRELKAAVPDTVVEPALKAALKL-YHVS 259
                :...|.....|.||..:..|.:..|:.|.:|..::.:.......|.|.|...:.|. .:..
  Fly   225 ----KHCSGSPITIVDDGYEQAMSQEHKELWNTMLPLKKRMVCQASQLVSEYADYNSNKFRIYKC 285

Human   260 DSEGNLVVREV-ATRPLTQDLLSHEDCYILDQGGLKIYVWKGKKANEQEKKGAMSHALNFIKAKQ 323
            :..|.|.:.:: ...|...||......|:||..|..|::|.|.:|.:.:...||.:...|:|.|:
  Fly   286 NQRGRLHLDQLDVGMPAKDDLSDAHGVYLLDNYGQSIWLWVGGQAPQADALSAMGNGRAFVKKKK 350

Human   324 YPPSTQVEVQNDGAESAVFQQLFQKWTASNRTSGLGKTHTVGSVAKVEQVKF---DATSMHVKPQ 385
            ||.:|.|....:|.|...|::||..|.      .:.:.:|.|.  |....||   ||.|:..:|:
  Fly   351 YPDNTLVVRVLEGHEPVEFKRLFANWL------NVWQENTRGH--KPVSTKFGKLDAHSLCERPK 407

Human   386 VAAQQKMVDDGSGEVQVWRI--ENLELVPVDSKWL-----GHF---YGGDCYLLLYTYLIGEKQH 440
            :||..::||||.||..::|:  :.::.||: ||.:     ..|   |...|..::...|......
  Fly   408 MAADTQLVDDGRGERVIYRVFGDQVQEVPI-SKTVVFTTNASFVVKYSVQCATVVPADLASVGIK 471

Human   441 YLLYVWQGSQASQDEITASAYQAVILDQKYNG--EP-VQIRVPMGKEPPHLMSIFKGRMVVYQGG 502
            .::|.|.||:||.:.|:.:...|   ...::|  || :.:::....||||.:.||:|::::.:| 
  Fly   472 TIIYQWNGSEASVESISRADKFA---KASFDGLKEPGMFVQLYEFDEPPHFLQIFEGKLIIRRG- 532

Human   503 TSRTNNLETGPS-----TRLFQVQGTGANNTKAFEVPARANFLNSNDVFVLKTQSCCYLWCGKGC 562
             .||.....|.|     |.|.:|.|..:.|.||.| ....:.::|.|.:|:||.. .::|||:..
  Fly   533 -QRTEMPYNGNSNALLDTFLLKVYGDASYNAKAVE-ETHLSSISSKDCYVIKTNH-VWVWCGQSS 594

Human   563 SGDEREMAKMVADTISRTEKQVVVEGQEPANFWMALGGKAPYANTKRLQEENLVITPRLFECSNK 627
            :||.|||||.|...:.  |..:|:||:|...||.::   |.|.|      :.|||......||:.
  Fly   595 TGDAREMAKAVGALMG--ENSLVLEGKESKEFWQSV---AMYFN------QTLVINGNGNSCSSS 648

Human   628 TGR-------------------------FLATEIPD-------------------------FNQD 642
            |..                         :|.|.:|.                         |:|.
  Fly   649 TSSSSGAGSMCNGSSNGGNISPTLSNNCYLNTSVPSKPRPPVQLFLVWWQQSSLRYEEILGFDQQ 713

Human   643 DLEEDDVFLLDVWDQVFFWIGKHANEEEKKAAATTAQEYLKTHPSGRDPETPIIVVKQGHEPPTF 707
            ||..|..::||.....:.|:|..|..:|:..|  .||.|::..|.||...|.:.||:|..||..|
  Fly   714 DLSSDCTYILDTGSLTYVWLGSQAPNQERYTA--IAQSYVQNAPFGRRSATALAVVRQFQEPNVF 776

Human   708 TGWFLAWDPFKWSNTKSYEDLKAELGNSRD-----WSQITAEVTSPKVDVFNANSNLSSGPLPIF 767
            .|:|.:|......|..|||.::.:|||...     .|:.:|.:.:.:...|:.:..        :
  Fly   777 KGFFESWQNDYGKNFHSYEKMRKDLGNKVTSNCCFASEGSALILNNRQKDFDGHKK--------Y 833

Human   768 PLEQLVNKPVEELPEGVDPSRKEEHLSIEDFTQAFGMTPAAFSALPRWKQQNLKKEKGLF 827
            ||..|:.: ::.||..::|.::|.||:.:||...|.|:...|..||:||:..|||:..||
  Fly   834 PLTVLIQE-MDMLPPDINPLKREVHLTHDDFVSVFNMSFYEFDELPKWKKMELKKQFKLF 892

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VIL1NP_009058.2 Core 2..734 217/805 (27%)
Necessary for homodimerization 2..126 37/123 (30%)
gelsolin_S1_like 17..121 CDD:200446 35/118 (30%)
LPA/PIP2-binding site 1 112..119 2/10 (20%)
gelsolin_S2_like 136..225 CDD:200445 20/89 (22%)
LPA/PIP2-binding site 2 138..146 2/7 (29%)
gelsolin_S3_like 250..348 CDD:200448 28/99 (28%)
gelsolin_S4_like 392..492 CDD:200449 30/112 (27%)
gelsolin_S5_like 513..603 CDD:200444 32/94 (34%)
gelsolin_S6_like 619..715 CDD:200447 33/145 (23%)
Headpiece 735..827 24/96 (25%)
VHP 792..827 CDD:460493 14/34 (41%)
LPA/PIP2-binding site 3 816..824 4/7 (57%)
quaNP_001246066.1 ADF_gelsolin 26..147 CDD:472830 33/108 (31%)
gelsolin_like 164..254 CDD:200436 22/101 (22%)
gelsolin_S3_like 276..375 CDD:200448 28/98 (29%)
GEL 424..526 CDD:214590 26/105 (25%)
ADF_gelsolin 551..625 CDD:472830 28/77 (36%)
gelsolin_like 689..780 CDD:200436 26/92 (28%)
VHP 857..892 CDD:128458 14/34 (41%)

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