DRSC/TRiP Functional Genomics Resources

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Protein Alignment VHL and Vhl

DIOPT Version :10

Sequence 1:NP_000542.1 Gene:VHL / 7428 HGNCID:12687 Length:213 Species:Homo sapiens
Sequence 2:NP_033533.1 Gene:Vhl / 22346 MGIID:103223 Length:181 Species:Mus musculus


Alignment Length:211 Identity:157/211 - (74%)
Similarity:168/211 - (79%) Gaps:34/211 - (16%)


- Green bases have known domain annotations that are detailed below.


Human     1 MPRRAENWDEAEVGAEEAGVEEYGPEEDGGEESGAEESGPEESGPEELGAEEEMEAGRPRPVLRS 65
            |||:|.:                 |||..|           |.||      ||||||||||||||
Mouse     1 MPRKAAS-----------------PEEAAG-----------EPGP------EEMEAGRPRPVLRS 31

Human    66 VNSREPSQVIFCNRSPRVVLPVWLNFDGEPQPYPTLPPGTGRRIHSYRGHLWLFRDAGTHDGLLV 130
            |||||||||||||||||||||:||||||||||||.||||||||||||||||||||||||||||||
Mouse    32 VNSREPSQVIFCNRSPRVVLPLWLNFDGEPQPYPILPPGTGRRIHSYRGHLWLFRDAGTHDGLLV 96

Human   131 NQTELFVPSLNVDGQPIFANITLPVYTLKERCLQVVRSLVKPENYRRLDIVRSLYEDLEDHPNVQ 195
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||:|:|:
Mouse    97 NQTELFVPSLNVDGQPIFANITLPVYTLKERCLQVVRSLVKPENYRRLDIVRSLYEDLEDYPSVR 161

Human   196 KDLERLTQERIAHQRM 211
            ||::||:||.:..|.:
Mouse   162 KDIQRLSQEHLESQHL 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VHLNP_000542.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..65 23/63 (37%)
8 X 5 AA tandem repeats of G-[PAVG]-E-E-[DAYSLE] 14..53 7/38 (18%)
VHL 63..144 CDD:460360 78/80 (98%)
Involved in binding to CCT complex 100..155 53/54 (98%)
VHL_C 156..204 CDD:407332 41/47 (87%)
Interaction with Elongin BC complex 157..166 8/8 (100%)
VhlNP_033533.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..30 22/62 (35%)
VHL 29..110 CDD:460360 78/80 (98%)
VHL_C 122..170 CDD:407332 41/47 (87%)
Interaction with Elongin BC complex. /evidence=ECO:0000250 123..132 8/8 (100%)

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