Sequence 1: | NP_001351014.1 | Gene: | VDR / 7421 | HGNCID: | 12679 | Length: | 494 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001163061.1 | Gene: | EcR / 35540 | FlyBaseID: | FBgn0000546 | Length: | 878 | Species: | Drosophila melanogaster |
Alignment Length: | 571 | Identity: | 156/571 - (27%) |
---|---|---|---|
Similarity: | 237/571 - (41%) | Gaps: | 117/571 - (20%) |
- Green bases have known domain annotations that are detailed below.
Human 2 EAMAASTSLPDPGDFDRNVPRI----CGVCGDRATGFHFNAMTCEGCKGFFRRSMKRKALFTCPF 62
Human 63 NGDCRITKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRKREMILKRKEEEALKDSLRPKLSEE 127
Human 128 QQRIIAILLDAHHKTYDPTYSDFCQFRPPVRVNDGGGSHPSRP----------NSRHTPSFSGDS 182
Human 183 SSSCSDHCITSSDMMDSSSFSNLD--LSEEDSDDPSVTLELSQLSMLPHLADLVSYSIQKVIGFA 245
Human 246 KMIPGFRDLTSEDQIVLLKSSAIEVIMLRSNESFT-MDDMSWTCGNQDYKYRVSDVTKAGHSLEL 309
Human 310 IEPLIKFQVGLKKLNLHEEEHVLLMAICIVSPDRPGVQDAALIEAIQDRLSNTLQTYIRCRHPPP 374
Human 375 GSHLL-YAKMIQKLADLRSLNEEHSKQYRCLSFQPECSMKLTPLVLEVFGNEI------------ 426
Human 427 -------------------SXLGQPVAVPGWGCSSRATCQARGWRLLSSPPHPVWGSA------- 465
Human 466 ---------PPLPPPL--STQPILSP---------VQPNP--FPAGFSPVP 494 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
VDR | NP_001351014.1 | NR_DBD_VDR | 16..122 | CDD:143513 | 46/109 (42%) |
Hinge | 97..126 | 5/28 (18%) | |||
NR_LBD_VDR | 124..426 | CDD:132731 | 80/315 (25%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 158..190 | 5/41 (12%) | |||
Vitamin D3 binding | 227..237 | 1/9 (11%) | |||
Vitamin D3 binding | 271..278 | 3/6 (50%) | |||
9aaTAD. /evidence=ECO:0000269|PubMed:30468856 | 416..424 | 2/7 (29%) | |||
EcR | NP_001163061.1 | NR_DBD_EcR | 261..351 | CDD:143535 | 42/93 (45%) |
NR_LBD_EcR | 420..652 | CDD:132736 | 73/250 (29%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C165157554 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24082 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.940 |