DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment VDAC3 and por1

DIOPT Version :10

Sequence 1:NP_001129166.1 Gene:VDAC3 / 7419 HGNCID:12674 Length:284 Species:Homo sapiens
Sequence 2:NP_001342966.1 Gene:por1 / 2542750 PomBaseID:SPAC1635.01 Length:282 Species:Schizosaccharomyces pombe


Alignment Length:290 Identity:84/290 - (28%)
Similarity:135/290 - (46%) Gaps:21/290 - (7%)


- Green bases have known domain annotations that are detailed below.


Human     5 PTYCDLGKAAKDVFNKGYGFGMVKIDLKTKSCSGVMEFSTSGHAYTDTGKASGNLETKYKVCNYG 69
            |.|..:.|...|:..:.:..|...:.::|.:.:||: |:.||: ....|..||.|||.:.....|
pombe     4 PAYAAINKLCNDLLQRDFPVGATLLSVRTTAPNGVV-FNVSGN-QDAKGVISGKLETSFNDKANG 66

Human    70 LTFTQKWNTDNTLGTEISWENKLAEGLKLTLDTIFVPNTGKKSGKLKASYKRDCFSVGSNVDI-- 132
            ||.:|.|.|.|.|.:::....:.|.||.|.::|.|.|.|..|:..|...::.......::|:.  
pombe    67 LTISQGWTTANVLESKVGLSEQFAPGLHLNVNTTFSPATAAKTAILNLEHQHPLIHTHASVNALE 131

Human   133 -----DFSGPTIYGWAVLAFEGWLAGYQMSFDTAKSKLSQNNFALGYKAADFQLHTHV-NDGTEF 191
                 ||:         :..||:|||.:..:|..|..:|.....:||.|:...:.... |:.:.|
pombe   132 RKFLGDFT---------VGHEGFLAGAEFGYDVQKGNVSNYAATIGYLASPLSVALQASNNLSVF 187

Human   192 GGSIYQKVNEKIETSINLAWTAGS--NNTRFGIAAKYMLDCRTSLSAKVNNASLIGLGYTQTLRP 254
            ..|.|.:|:..:|...|:.|.|.|  |.....:|:||.||..|.:..|:|:|.:..|.|.||:||
pombe   188 RASYYHRVSSDVEAGGNVTWDAASTANAITLELASKYALDKDTFVKGKINSAGVATLSYFQTVRP 252

Human   255 GVKLTLSALIDGKNFSAGGHKVGLGFELEA 284
            ||.:.|...:|.:......||.||.....|
pombe   253 GVTVGLGLQLDTQRLGQPAHKAGLSLAFSA 282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VDAC3NP_001129166.1 Porin3_VDAC 5..283 CDD:132767 83/287 (29%)
por1NP_001342966.1 Porin3_VDAC 3..281 CDD:132767 83/287 (29%)

Return to query results.
Submit another query.