DRSC/TRiP Functional Genomics Resources

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Protein Alignment VDAC3 and vdac-1

DIOPT Version :10

Sequence 1:NP_001129166.1 Gene:VDAC3 / 7419 HGNCID:12674 Length:284 Species:Homo sapiens
Sequence 2:NP_501211.1 Gene:vdac-1 / 177524 WormBaseID:WBGene00019900 Length:283 Species:Caenorhabditis elegans


Alignment Length:281 Identity:111/281 - (39%)
Similarity:165/281 - (58%) Gaps:6/281 - (2%)


- Green bases have known domain annotations that are detailed below.


Human     5 PTYCDLGKAAKDVFNKGYGFGMVKIDLKTKSCSG-VMEFSTSGHAYTDTGKASGNLETKYKVCNY 68
            ||:.||||:|||:|||||.||.:|||..|::... .:||.::......:||..|||:.|||:..|
 Worm     4 PTFADLGKSAKDLFNKGYNFGFLKIDSTTRAGDNKEVEFKSAASHNIGSGKLGGNLDVKYKIPQY 68

Human    69 GLTFTQKWNTDNTLGTEISWENKLAEGLKLTLDTIFVPNTGKKSGKLKASYKRDCFSVGSNVDID 133
            |:|.|:||||:|.|||.|....:...|||:|||:::.|:.||:|||:|..:......|.::|.:.
 Worm    69 GITLTEKWNTENQLGTVIEVNEQFGRGLKVTLDSLYAPHAGKRSGKVKLDWALPTARVTADVGVT 133

Human   134 FSGPTIYGWAVLAFEGWLAGYQMSFDTAKSKLSQNNFALGYKAADFQLHTHVNDGTEFGGSIYQK 198
             |.|.|....|.:.:|||.|...:||::.:||:..:.|.|:....:.||:.|.:.|:||.|:|.|
 Worm   134 -SAPVINAAGVFSRDGWLIGAAATFDSSSNKLAATSLAFGHSTPQYTLHSFVINSTDFGASLYHK 197

Human   199 VNEKIETSINLAWTAGSNNTRFGIAAKYMLDCRTSLSAKVNNASLIGLGYTQTLRPGVKLTLSAL 263
            |...:|....|.|..|.|...:.:|.||......::.||||::|.:.:..|.:|.|.:|||||..
 Worm   198 VASNVEVGTQLGWKVGGNGADYALATKYAPSRDLTVRAKVNSSSQVAVAATHSLSPALKLTLSTQ 262

Human   264 IDGKNFSAG-GHKVGLGFELE 283
            .   |.:|. .||.|||.|.:
 Worm   263 F---NLAANDAHKFGLGLEFD 280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VDAC3NP_001129166.1 Porin3_VDAC 5..283 CDD:132767 111/279 (40%)
vdac-1NP_501211.1 Porin3_VDAC 3..280 CDD:132767 111/279 (40%)

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