DRSC/TRiP Functional Genomics Resources

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Protein Alignment VDAC1 and Vdac1

DIOPT Version :10

Sequence 1:NP_001387957.1 Gene:VDAC1 / 7416 HGNCID:12669 Length:297 Species:Homo sapiens
Sequence 2:XP_063126031.1 Gene:Vdac1 / 83529 RGDID:621575 Length:303 Species:Rattus norvegicus


Alignment Length:297 Identity:279/297 - (93%)
Similarity:282/297 - (94%) Gaps:14/297 - (4%)


- Green bases have known domain annotations that are detailed below.


Human     1 MAVPPTYADLGKSARDVFTKGYGFGLIKLDLKTKSENGLEFTSSGSANTETTKVTGSLETKYRWT 65
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||
  Rat    21 MAVPPTYADLGKSARDVFTKGYGFGLIKLDLKTKSENGLEFTSSGSANTETTKVNGSLETKYRWT 85

Human    66 EYGLTFTEKWNTDNTLGTEITVEDQLARGLKLTFDSSFSPNTGLSPCGREVVSCSLWKKNAKIKT 130
            |||||||||||||||||||||||||||||||||||||||||||              ||||||||
  Rat    86 EYGLTFTEKWNTDNTLGTEITVEDQLARGLKLTFDSSFSPNTG--------------KKNAKIKT 136

Human   131 GYKREHINLGCDMDFDIAGPSIRGALVLGYEGWLAGYQMNFETAKSRVTQSNFAVGYKTDEFQLH 195
            ||||||||||||:||||||||||||||||||||||||||||||:|||||||||||||||||||||
  Rat   137 GYKREHINLGCDVDFDIAGPSIRGALVLGYEGWLAGYQMNFETSKSRVTQSNFAVGYKTDEFQLH 201

Human   196 TNVNDGTEFGGSIYQKVNKKLETAVNLAWTAGNSNTRFGIAAKYQIDPDACFSAKVNNSSLIGLG 260
            |||||||||||||||||||||||||||||||||||||||||||||:|||||||||||||||||||
  Rat   202 TNVNDGTEFGGSIYQKVNKKLETAVNLAWTAGNSNTRFGIAAKYQVDPDACFSAKVNNSSLIGLG 266

Human   261 YTQTLKPGIKLTLSALLDGKNVNAGGHKLGLGLEFQA 297
            |||||||||||||||||||||||||||||||||||||
  Rat   267 YTQTLKPGIKLTLSALLDGKNVNAGGHKLGLGLEFQA 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VDAC1NP_001387957.1 Porin3_VDAC 4..296 CDD:132767 273/291 (94%)
Vdac1XP_063126031.1 None

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