Sequence 1: | NP_009057.1 | Gene: | VCP / 7415 | HGNCID: | 12666 | Length: | 806 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001259506.1 | Gene: | comt / 47091 | FlyBaseID: | FBgn0000346 | Length: | 745 | Species: | Drosophila melanogaster |
Alignment Length: | 619 | Identity: | 176/619 - (28%) |
---|---|---|---|
Similarity: | 283/619 - (45%) | Gaps: | 122/619 - (19%) |
- Green bases have known domain annotations that are detailed below.
Human 142 AYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLN---EVGY 203
Human 204 DDIGGCRKQLAQI-KEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAV-----ANET 262
Human 263 GAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPA--------IIFIDELDAIAPKREKTHGE 319
Human 320 --VERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQ 382
Human 383 IHTKNM----KLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDE-TIDAEVM 442
Human 443 NSLAVTMDDFRWALSQSNPSA------LRETVVEVPQVTWEDIGG-----LEDVKRELQELVQYP 496
Human 497 VEHPDKFLKFGMTPSKG---VLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA- 557
Human 558 ---NVREIFDKA-RQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTK---- 614
Human 615 -KNVFIIGATNRPDIIDPAILRPGRLDQLIYIP---LPDEKSRVAILKANLRKSPVAKDVDLEFL 675
Human 676 AKMTNG---FSG----------ADLTEICQRACK 696 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
VCP | NP_009057.1 | CDC48 | 25..764 | CDD:273521 | 176/619 (28%) |
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 708..727 | ||||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 768..806 | ||||
Interaction with UBXN6. /evidence=ECO:0000269|PubMed:18656546 | 797..806 | ||||
PIM motif. /evidence=ECO:0000269|PubMed:24726327 | 802..806 | ||||
comt | NP_001259506.1 | CDC48_N | 5..83 | CDD:215012 | |
CDC48_2 | 111..>158 | CDD:215011 | |||
SpoVK | 242..699 | CDD:223540 | 149/499 (30%) | ||
AAA | 256..397 | CDD:278434 | 62/144 (43%) | ||
AAA | 539..668 | CDD:278434 | 31/141 (22%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0464 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |