Sequence 1: | NP_009057.1 | Gene: | VCP / 7415 | HGNCID: | 12666 | Length: | 806 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001287235.1 | Gene: | pch2 / 41013 | FlyBaseID: | FBgn0051453 | Length: | 421 | Species: | Drosophila melanogaster |
Alignment Length: | 245 | Identity: | 67/245 - (27%) |
---|---|---|---|
Similarity: | 108/245 - (44%) | Gaps: | 46/245 - (18%) |
- Green bases have known domain annotations that are detailed below.
Human 489 LQELVQYPVEHPDKFLKFGMTP---------------SKGVLFYGPPGCGKTLLAKAIANE---- 534
Human 535 -----CQANFISIKGPELLTMWFGESEANVREIFDKARQAAP------CVLFFDELDSIAKARGG 588
Human 589 NIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPD---- 649
Human 650 ---------EKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEI 690 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
VCP | NP_009057.1 | CDC48 | 25..764 | CDD:273521 | 67/245 (27%) |
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 708..727 | ||||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 768..806 | ||||
Interaction with UBXN6. /evidence=ECO:0000269|PubMed:18656546 | 797..806 | ||||
PIM motif. /evidence=ECO:0000269|PubMed:24726327 | 802..806 | ||||
pch2 | NP_001287235.1 | AAA | 166..315 | CDD:214640 | 48/151 (32%) |
AAA | 169..314 | CDD:278434 | 48/147 (33%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0464 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |