| Sequence 1: | NP_001069.1 | Gene: | VCAM1 / 7412 | HGNCID: | 12663 | Length: | 739 | Species: | Homo sapiens |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001260013.1 | Gene: | ed / 33619 | FlyBaseID: | FBgn0000547 | Length: | 1332 | Species: | Drosophila melanogaster |
| Alignment Length: | 628 | Identity: | 143/628 - (22%) |
|---|---|---|---|
| Similarity: | 246/628 - (39%) | Gaps: | 137/628 - (21%) |
- Green bases have known domain annotations that are detailed below.
|
Human 43 VSLTCSTT-GCESPFFSW-RTQIDSP-----LNGKVTNEGTTSTLTMNPVSFGNEHSYLCT---- 96
Human 97 ATCESRKLEKGIQVEIYSFPKDPEIHLSGPLEAGKPITVK--CSVADVYPFDRLEIDLLKGDHLM 159
Human 160 KSQEFLEDADRKSLETKSLEVTFTPV-IEDIGKVLVCRAKLHIDEMDSVPTVRQAVKELQVYISP 223
Human 224 KNTVISVNPSTKLQEGGSVTMTCSSEGLPAP-EIFWSKKLD-----NGNLQHLSGNATLTLIAMR 282
Human 283 MEDSGIYVCEGVNLI---GKNRKE------VELIVQEKPFTVEISPGPRIAAQIGDSVMLTCSV- 337
Human 338 -MGCESPSFSWRTQIDSPLSG--KVRSEGTNSTLTLSPVSFENEHSYLCTVTCGHKKLEKG---- 395
Human 396 --IQVELYSFPR---DPEIEMSGGLVNGSSVTVSCK-----VPSVYPLDRLEIELLKGETILENI 450
Human 451 EFLEDTDMKSLENKSLEMTFIPTIEDTGKALVCQAKLHIDDMEFEPKQRQSTQTLY---VNVAPR 512
Human 513 DTTVLVSPSSIL---------EEGSSVNMTCLSQGFPAPKILWSRQLPNG------------ELQ 556
Human 557 PLSEN-----ATLTLISTKMEDSGVYLCEGINQAGRSRKEVEL 594 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| VCAM1 | NP_001069.1 | IG | 33..112 | CDD:214652 | 21/79 (27%) |
| Ig_VCAM-1 | 116..214 | CDD:143313 | 20/100 (20%) | ||
| IGc2 | 238..298 | CDD:197706 | 22/68 (32%) | ||
| I-set | 313..399 | CDD:333254 | 23/95 (24%) | ||
| Ig_VCAM-1 | 404..502 | CDD:143313 | 21/105 (20%) | ||
| IG_like | 519..596 | CDD:214653 | 19/102 (19%) | ||
| IG | 609..685 | CDD:214652 | |||
| ed | NP_001260013.1 | Ig | 50..147 | CDD:299845 | |
| I-set | 146..249 | CDD:254352 | 21/79 (27%) | ||
| Ig | 168..249 | CDD:299845 | 21/79 (27%) | ||
| IGc2 | 268..323 | CDD:197706 | 16/72 (22%) | ||
| Ig_3 | 341..406 | CDD:290638 | 20/72 (28%) | ||
| Ig_2 | 437..514 | CDD:290606 | 22/84 (26%) | ||
| I-set | 526..633 | CDD:254352 | 26/122 (21%) | ||
| Ig | 546..632 | CDD:143165 | 24/100 (24%) | ||
| IG_like | 654..736 | CDD:214653 | 18/84 (21%) | ||
| Ig | 656..734 | CDD:143165 | 17/79 (22%) | ||
| FN3 | 741..848 | CDD:238020 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| User_Submission | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.910 | |||||