DRSC/TRiP Functional Genomics Resources

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Protein Alignment VBP1 and mgr

DIOPT Version :10

Sequence 1:NP_001290472.1 Gene:VBP1 / 7411 HGNCID:12662 Length:233 Species:Homo sapiens
Sequence 2:NP_650067.1 Gene:mgr / 41365 FlyBaseID:FBgn0264694 Length:194 Species:Drosophila melanogaster


Alignment Length:197 Identity:100/197 - (50%)
Similarity:141/197 - (71%) Gaps:7/197 - (3%)


- Green bases have known domain annotations that are detailed below.


Human    37 MAAVKDSCGKGEMATGNGRRLHLGIPEAVFVEDVDSFMKQPGNETADTVLKKLDEQYQKYKFMEL 101
            |..:.||....::.  ..::...|||||||:|::|:||.||.||..:.||::||||:.||:||..
  Fly     1 MTGIMDSVEMPKLP--ENQKTFAGIPEAVFLEEIDTFMSQPENENCEKVLQRLDEQHGKYRFMAC 63

Human   102 NLAQKKRRLKGQIPEIKQTLEILKYMQKKKESTNSMETRFLLADNLYCKASVPPTDKVCLWLGAN 166
            ||..::|:||.|||:::::||::..::|:.|   ..||:|||:|.::.|..||||..|.|||||:
  Fly    64 NLEARRRKLKSQIPDLERSLEMVNVLRKEDE---ERETQFLLSDQVFIKTLVPPTKTVYLWLGAS 125

Human   167 VMLEYDIDEAQALLEKNLSTATKNLDSLEEDLDFLRDQFTTTEVNMARVYNWDVKRRNKDDSTKN 231
            |||||.:|||:|||.:|:::|..||.|:|.|.||||||.|||||||||||||.||:|..  :||.
  Fly   126 VMLEYPLDEAEALLNQNITSAVGNLKSVEHDQDFLRDQITTTEVNMARVYNWGVKKRQA--ATKT 188

Human   232 KA 233
            .|
  Fly   189 TA 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VBP1NP_001290472.1 Prefoldin_3 88..216 CDD:467472 70/127 (55%)
coiled coil 88..127 CDD:467472 18/38 (47%)
coiled coil 174..216 CDD:467472 28/41 (68%)
mgrNP_650067.1 Prefoldin_3 50..175 CDD:467472 70/127 (55%)
coiled coil 50..89 CDD:467472 18/38 (47%)
coiled coil 133..175 CDD:467472 28/41 (68%)

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