DRSC/TRiP Functional Genomics Resources

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Protein Alignment VAV1 and GEFmeso

DIOPT Version :10

Sequence 1:NP_005419.2 Gene:VAV1 / 7409 HGNCID:12657 Length:845 Species:Homo sapiens
Sequence 2:NP_788403.2 Gene:GEFmeso / 37134 FlyBaseID:FBgn0050115 Length:1549 Species:Drosophila melanogaster


Alignment Length:204 Identity:44/204 - (21%)
Similarity:68/204 - (33%) Gaps:58/204 - (28%)


- Green bases have known domain annotations that are detailed below.


Human   114 KNLLSLPVCV-----LMD--PDVRIFFYQSAYDAEQVPQALRRLRPRTRKIKGVSPQGAIMDRME 171
            |..|.:..||     ::|  ||.|:..:|:.....|:...|..|..|....|.:.|...::....
  Fly   214 KMYLIMEYCVGGLQEMLDSVPDKRLPIHQAHDYFVQLLDGLEYLHGRGIIHKDIKPGNLLLTLDH 278

Human   172 APR------AEALFDF-------TGNSKLEL---SFKAGDVIFLLSKINKDWLEGTS--QGATGI 218
            ..:      ||||..|       ||......   ....|..:|...|:: .|..|.:  ...||:
  Fly   279 TLKISDFGVAEALDTFAPTDECTTGQGSPAFQPPEIANGHEVFSGFKVD-IWSTGVTLYNITTGL 342

Human   219 FP---GSFVKILKDFPEDE-DTTNWLRCYFYEDTGKTIKDIAVEEDLSSTPLFKDLL-----ALM 274
            :|   .:..|:|::..:.| :...||.                       |...|||     |..
  Fly   343 YPFEGDNIYKLLENIGKCEWNPPEWLE-----------------------PRLADLLVNILQADP 384

Human   275 RREFQREDI 283
            ||.|..:.|
  Fly   385 RRRFTLQQI 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VAV1NP_005419.2 CH_VAV1 2..121 CDD:409111 2/6 (33%)
RhoGEF 195..371 CDD:238091 21/100 (21%)
PH_Vav 385..508 CDD:269930
C1_VAV1 510..566 CDD:410417
SH3_VAV1_1 596..658 CDD:212912
SH2_Vav1 665..767 CDD:198268
SH3_VAV1_2 786..839 CDD:212909
GEFmesoNP_788403.2 RhoGEF 548..712 CDD:459876
PH_PLEKHG1_G2_G3 694..839 CDD:270063
Blue background indicates that the domain is not in the aligned region.

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