DRSC/TRiP Functional Genomics Resources

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Protein Alignment VAV1 and mug10

DIOPT Version :10

Sequence 1:NP_005419.2 Gene:VAV1 / 7409 HGNCID:12657 Length:845 Species:Homo sapiens
Sequence 2:NP_593309.2 Gene:mug10 / 2541637 PomBaseID:SPAC57A10.04 Length:344 Species:Schizosaccharomyces pombe


Alignment Length:294 Identity:59/294 - (20%)
Similarity:115/294 - (39%) Gaps:73/294 - (24%)


- Green bases have known domain annotations that are detailed below.


Human   178 MRSEPVSMPPKMTEYDKRCCCLREIQQTEEKYTDTLGSIQQHFLKPLQRFLKPQDIEIIFINI-- 240
            :.::.|...| .||::.   .|:||..||..|:..|.......:.|::    .|.:|...|.|  
pombe    36 LEAKAVEQTP-ATEFNS---ILQEIISTEYNYSVDLKKTLNEIIMPIE----GQSMEREAIGICT 92

Human   241 --EDLLRVHTHFLKEMKEALGTPGAANLYQVFIKYKERFLVYGRYCSQVESASKHLDRVAAARED 303
              :.|.::||...::|..: |:| ..:|.|....:::   ||..|...:...|        |.|.
pombe    93 CFKTLNQLHTKLYQQMISS-GSP-VYSLSQSLPAFRD---VYHMYTINLSGIS--------AIEK 144

Human   304 VQMKLEECSQRANNGRFTLRDLLMVPMQRVLKYHLLLQELVKHTQE-AMEKENLRLA---LDAMR 364
            :......|:.:           |::|:|.:|:|.:.|..:.|..:: .....:.|:|   ||..|
pombe   145 IISDPSSCNSQ-----------LLIPLQHLLRYPIHLARVCKMLRKYPFLNGDFRMAVKTLDDFR 198

Human   365 DLAQCVNEVKRDNETLRQIT----------------NFQLSI-------------ENLDQSLAHY 400
            :|...:::.|...|:.:.::                .|:.|:             ...|..|..:
pombe   199 ELCSYIDQEKAREESYQVLSALCGNQGVAVDIPRHIKFKGSVIPATSFIYDFNACVFCDDGLVVW 263

Human   401 GRPKIDGELKITSVERRSKMDRYAFLLDKALLIC 434
            .|.....|:|..|:|:..::|.    |..::|:|
pombe   264 TRYVKKIEMKAVSIEQCLRVDE----LSNSILVC 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VAV1NP_005419.2 CH_VAV1 2..121 CDD:409111
RhoGEF 195..371 CDD:238091 40/183 (22%)
PH_Vav 385..508 CDD:269930 13/63 (21%)
C1_VAV1 510..566 CDD:410417
SH3_VAV1_1 596..658 CDD:212912
SH2_Vav1 665..767 CDD:198268
SH3_VAV1_2 786..839 CDD:212909
mug10NP_593309.2 RhoGEF 52..205 CDD:459876 40/180 (22%)
Blue background indicates that the domain is not in the aligned region.

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