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Protein Alignment Nmnat3 and Nmnat

DIOPT Version :9

Sequence 1:	NP_653116.1	Gene:	Nmnat3 / 74080	MGIID:	1921330	Length:	245	Species:	Mus musculus
Sequence 2:	NP_651315.2	Gene:	Nmnat / 42987	FlyBaseID:	FBgn0039254	Length:	389	Species:	Drosophila melanogaster

Alignment Length:	254	Identity:	112/254 - (44%)
Similarity:	156/254 - (61%)	Gaps:	22/254 - (8%)

- Green bases have known domain annotations that are detailed below.

Mouse     2 KNRIP-VVLLACGSFNPITNMHLRLFEVARDHLHQTGRYQVIEGIISPVNDSYGKKDLVASHHRV 65
            |:.:| :..:|||.|:|.|.||||:||:|:||....|.::|:.|||||.:||||||.|.::..|.
  Fly    40 KSLLPRIAFIACGCFSPPTPMHLRMFEIAKDHFEMQGTHRVVGGIISPTHDSYGKKGLASALDRC 104

Mouse    66 AMARLALQTSDWIRVDPWESEQAQWMETVKVLRHHHREL---LRSSAQMDGPDPSKTPSASAALP 127
            ||.:||.|:|:|||:..||..|.|||.|..||:||...:   :.|..  .|.|..:.......||
  Fly   105 AMVKLATQSSNWIRLSDWEVHQNQWMRTQAVLQHHQNYINNHINSGG--GGGDDGENTHLPGWLP 167

Mouse   128 ----------ELKLLCGADVLKTFQTPNLWKDTHIQEIVEKFGLVCVSRSGHDPERYISDSPILQ 182
                      .||||||||:|::|..|.||.:..|::||...|||.::|:|.:|.::|.||.||.
  Fly   168 RGLHDSRDPVHLKLLCGADLLESFAVPGLWAEADIEDIVANHGLVVITRAGSNPGKFIFDSDILT 232

Mouse   183 QFQHNIHLAREPVLNEISATYVRKALGQGQSVKYLLPEAVITYIRDQGL------YIND 235
            ::|.||.|....|.||:|:|.:|:.||:||||||||.:.|:.||:.|.|      ||.|
  Fly   233 KYQSNITLITNWVPNEVSSTLIRRLLGRGQSVKYLLDDLVLEYIKRQRLFNFKSKYITD 291

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.