Sequence 1: | XP_005249419.1 | Gene: | VARS1 / 7407 | HGNCID: | 12651 | Length: | 1265 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001189308.1 | Gene: | eEF1gamma / 44791 | FlyBaseID: | FBgn0029176 | Length: | 431 | Species: | Drosophila melanogaster |
Alignment Length: | 482 | Identity: | 127/482 - (26%) |
---|---|---|---|
Similarity: | 202/482 - (41%) | Gaps: | 128/482 - (26%) |
- Green bases have known domain annotations that are detailed below.
Human 3 TLYVSPHPDAFPSLRALIAARYGEAGEGPGWGGAHPRIC--LQPPPTSRT-----PFPPPRLPAL 60
Human 61 EQGPGGLWVWGATAVAQLLWPAGLGGPGGSRAAVLVQQWVSYADTELIPAACGATLPALGL---- 121
Human 122 --RSSAQDPQAVLGALGRALSPLEEWLRLHTYLAGEAPTLADLAAVTALLLPFRYVLDPPARRIW 184
Human 185 NNVTRWFVTCVRQPEFRAVLGEVVLYSGARPLSHQPGPEAPALPKT-AAQLKKEAKKREKLEKFQ 248
Human 249 QKQKIQQQQPPPGEQKKPKPE----KREKRDP------GVITYDLPTPPGEKKDVSGPMPDSYSP 303
Human 304 RY----VEAAWYPWWEQQGFFKPEYGRPNVSAANPRGVFMMCIPPPNVTGSLHLGHALTNAIQDS 364
Human 365 LTRWHRMR-------------GETTLWNPGCDHAGIATQVVVEKKLWREQGLSRHQLGREAFL-- 414
Human 415 ------QEVWKWKEEKGDRIYHQLKKL 435 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
VARS1 | XP_005249419.1 | GstA | <56..203 | CDD:223698 | 54/152 (36%) |
GST_C_ValRS_N | 92..213 | CDD:198327 | 47/126 (37%) | ||
PTZ00419 | 283..1265 | CDD:240411 | 36/178 (20%) | ||
ValRS_core | 336..939 | CDD:185677 | 28/121 (23%) | ||
tRNA-synt_1_2 | 514..>610 | CDD:290334 | |||
Anticodon_Ia_Val | 939..1076 | CDD:153416 | |||
Val_tRNA-synt_C | 1197..1259 | CDD:287436 | |||
eEF1gamma | NP_001189308.1 | GST_N_EF1Bgamma | 4..79 | CDD:239342 | 24/85 (28%) |
GstA | 5..187 | CDD:223698 | 65/200 (33%) | ||
GST_C_EF1Bgamma_like | 90..209 | CDD:198290 | 47/125 (38%) | ||
EF1G | 271..376 | CDD:279041 | 27/152 (18%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0625 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |