DRSC/TRiP Functional Genomics Resources

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Protein Alignment KDM6A and Jarid2

DIOPT Version :10

Sequence 1:NP_001406738.1 Gene:KDM6A / 7403 HGNCID:12637 Length:1489 Species:Homo sapiens
Sequence 2:NP_648324.1 Gene:Jarid2 / 39103 FlyBaseID:FBgn0036004 Length:2351 Species:Drosophila melanogaster


Alignment Length:769 Identity:159/769 - (20%)
Similarity:248/769 - (32%) Gaps:227/769 - (29%)


- Green bases have known domain annotations that are detailed below.


Human   376 LNATRSK-----SCSNTSALAARIKYL---QAQLCNLPQGSLQNKTKLL----------PSIEEA 422
            ||.|:.|     |.|:...||.::..:   :.:|  ||........||:          |::..|
  Fly   794 LNETKRKLEKSFSDSDDEPLAIKVPAVAVKEKEL--LPPKMASPPPKLVPVPSPISVPTPAVSVA 856

Human   423 WSLPIPAELTSRQG----------AMNTAQQACKPHHPNTEPVLGLSQTPI-SQQSLPLHMIPSS 476
            .||.:|:.|.:..|          |..|:.....|..|:.:    .|.:|: :.:..|  .:|:|
  Fly   857 PSLAVPSILPTSTGTTQLTMLPLTAKATSSLGSMPMFPSIQ----ASYSPLKTMEKKP--PVPTS 915

Human   477 QVDDLSSPA------------KRKRTSSPTKNTSDNWSGGHAVSHPPVQQQ-----AHSWCLTPQ 524
            ::  |:.||            ..::|||.....|.::..|: |..||....     |.|...||.
  Fly   916 KI--LNVPATYALPGSASGAVSFQKTSSYLPQASPHYHSGY-VRPPPTPTHQFGGGAPSGSKTPS 977

Human   525 K-----------------LQHLEQLRANRNNLNP--AQKLMLEQLESQFVLMQQHQMRPTGVAQV 570
            :                 ::..:..:.|.|.|.|  .:..:.....|.|......:.:||.....
  Fly   978 QGSSPLKYQTPPTTYPPPIEAYQCPKINPNFLTPKYERSPLPRSSTSSFPSPSPVKFQPTSGTTA 1042

Human   571 RSTGIPNGPTAD------SSLPTNSVSGQQPQLALTRVPSVSQPGVRPACPGQPLANGPFSAGH- 628
            .:.|.|:..|..      .|.|.:.|..|...|.|    |:|......|.| .|:|:...:|.| 
  Fly  1043 TTVGTPSSATKSPLAPPPPSPPVSQVVIQTSSLNL----SMSIAATVNAAP-MPVASTSAAAAHQ 1102

Human   629 VPCSTSRTLGSTDTILIGNNHITGSGSNGNVPYLQRNALTLPHNRTNLTSSAEEPWKNQLSNSTQ 693
            ...:|:.|..||......|:..||.|:..|...|:....::....|.:.|..|       |....
  Fly  1103 TTVATTVTATSTPPPAHSNSAATGGGAGANSDPLKDEIGSILAQATLMPSKEE-------SGKIF 1160

Human   694 GLHKGQSSHSAGPNGERPLSSTGPSQHLQAAGSGIQNQNGHPTLPSNSVTQGAALNHLSSHTATS 758
            |:.....:.|:||:..:.......|.|....|         |.:|    |:|...:.|||.... 
  Fly  1161 GIASVSLAQSSGPDNTKCTLGKCGSIHKPVLG---------PVVP----TEGYFGDQLSSKERR- 1211

Human   759 GGQQGITLTKES---------------------------KPSGNILTVPETSRHTGETPNSTASV 796
              :..:.:|.|.                           :|..:  |.|..:|...|...|.:|.
  Fly  1212 --KAKVNMTHEQIQKWLIECSSNPDEIQDDLDDDFDDSLRPQQS--TTPPPTRDDKELSASFSSS 1272

Human   797 EGLPNHVHQMTADAVCSPSHGDSKSPGLLS----------------SDNPQLSALLMGKANNNVG 845
            .      .....|...|.|...:|.|.|.:                :|:....||...|::..|.
  Fly  1273 S------KNTRGDLGKSESAWSAKGPSLKATPVLVTPPNRKELHEQADSKDCDALDYDKSSTPVN 1331

Human   846 TGTCDKVNNIHPAVHTK-TDNSVASSPSSAISTATPSPKSTEQTTTNSVTSLNSPHSGLHTINGE 909
            . |....:|...||..| .|.....|..:|.|.|...|:||..|....::|..:|.|        
  Fly  1332 L-TQKITSNESLAVEKKVNDRKGKESAKAAASKAATQPRSTAATPPTPISSTPTPAS-------- 1387

Human   910 GMEESQSPMKTDLLLVNHKPSPQIIPSMSVSIYPSSAEVLKACRNLGKNGLSNSSILLDKCPPPR 974
                          |...|.||...|::.     ..||  |..||....|  .::.|..      
  Fly  1388 --------------LTPSKSSPTPPPAVK-----QKAE--KGKRNATAGG--GATALAS------ 1423

Human   975 PPSSPYPPLP--------------------KDKLNPPT------PSIYLENKRD 1002
            ||::|.|..|                    |...|||:      .|:|...|.|
  Fly  1424 PPAAPTPANPKRTPVYNQKNAKAQQQQAETKPASNPPSGAGTKRESVYAFGKDD 1477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KDM6ANP_001406738.1 TPR repeat 93..121 CDD:276809
BepA 98..233 CDD:443813
TPR repeat 129..159 CDD:276809
TPR repeat 164..194 CDD:276809
LapB 171..443 CDD:442196 22/94 (23%)
TPR repeat 205..233 CDD:276809
TPR repeat 243..278 CDD:276809
TPR repeat 285..312 CDD:276809
TPR repeat 317..347 CDD:276809
TPR repeat 352..378 CDD:276809 1/1 (100%)
JmjC 1151..1215 CDD:214721
JmjC 1185..1293 CDD:396791
Jarid2NP_648324.1 PHA03247 <157..429 CDD:223021
Atrophin-1 762..>986 CDD:460830 44/202 (22%)
JmjN 1740..1781 CDD:128818
ARID_JARD2 1804..1915 CDD:350634
cupin_RmlC-like 2066..2181 CDD:477354
zf-C5HC2 2281..2334 CDD:460750
Blue background indicates that the domain is not in the aligned region.

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