DRSC/TRiP Functional Genomics Resources

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Protein Alignment UQCRC1 and mppb-1

DIOPT Version :10

Sequence 1:NP_003356.2 Gene:UQCRC1 / 7384 HGNCID:12585 Length:480 Species:Homo sapiens
Sequence 2:NP_501576.2 Gene:mppb-1 / 177725 WormBaseID:WBGene00013880 Length:458 Species:Caenorhabditis elegans


Alignment Length:449 Identity:191/449 - (42%)
Similarity:271/449 - (60%) Gaps:8/449 - (1%)


- Green bases have known domain annotations that are detailed below.


Human    21 RRSPALLRTPALRSTATFAQALQFVPETQVSLLDNGLRVASEQSSQPTCTVGVWIDVGSRFETEK 85
            ||..:.|...:.|..|.......|||||.|:.|.||.|||:|.:...|.|:||:||.|||:|.||
 Worm     3 RRLASGLYQTSQRRIAQVQPKSVFVPETIVTTLPNGFRVATENTGGSTATIGVFIDAGSRYENEK 67

Human    86 NNGAGYFLEHLAFKGTKNRPGSALEKEVESMGAHLNAYSTREHTAYYIKALSKDLPKAVELLGDI 150
            |||..:||||:|||||..|....||.|||::|||||||::||.|.||.|..::.|.::|::|.||
 Worm    68 NNGTAHFLEHMAFKGTPRRTRMGLELEVENIGAHLNAYTSRESTTYYAKCFTEKLDQSVDILSDI 132

Human   151 VQNCSLEDSQIEKERDVILREMQENDASMRDVVFNYLHATAFQGTPLAQAVEGPSENVRKLSRAD 215
            :.|.||....||.||.||:|||:|...:.::|||:.|||..|:|.||:..:.||.|.::.:::.|
 Worm   133 LLNSSLATKDIEAERGVIIREMEEVAQNFQEVVFDILHADVFKGNPLSYTILGPIELIQTINKND 197

Human   216 LTEYLSTHYKAPRMVLAAAGGVEHQQLLDLAQKHLGGIPWTYAEDAVPTLTPCRFTGSEIRHRDD 280
            |..|::|||::.||||||||||.|..::.:|:|:.|.:.   ..|:.....|..::..|:|....
 Worm   198 LQGYINTHYRSGRMVLAAAGGVNHDAIVKMAEKYFGELK---HGDSSTEFVPATYSPCEVRGDIP 259

Human   281 ALPFAHVAIAVEGPGWASPDNVALQVANAIIGHYDCTYGGGVHLSSPLASGAVANKLCQSFQTFS 345
            .||..:.|:.|||..|...||:||.|||.::|.||...|.||:..:.||.....:...:.||:|:
 Worm   260 DLPMLYGAMVVEGVSWTHEDNLALMVANTLMGEYDRMRGFGVNAPTRLAEKLSQDAGIEVFQSFN 324

Human   346 ICYAETGLLGAHFVCDRMKIDDMMFVLQGQWMRLCTSATESEVARGKNILRNALVSHLDGTTPVC 410
            .||.||||:|.:||.....||:::..:..||:.|..:..|:.|.|.|..|...|:..|||:||||
 Worm   325 TCYKETGLVGTYFVAAPESIDNLIDSVLQQWVWLANNIDEAAVDRAKRSLHTNLLLMLDGSTPVC 389

Human   411 EDIGRSLLTYGRRIPLAEWESRIAEVDASVVREICSKYIYD--QCPAVAG---YGPIEQ 464
            |||||.||.||||||..|..:||..:....:|::|.:...:  ...||.|   |.|:.:
 Worm   390 EDIGRQLLCYGRRIPTPELHARIESITVQQLRDVCRRVFLEGQVSAAVVGKTQYWPVNE 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UQCRC1NP_003356.2 PqqL 35..466 CDD:440377 187/435 (43%)
mppb-1NP_501576.2 PqqL 27..442 CDD:440377 183/417 (44%)

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