DRSC/TRiP Functional Genomics Resources

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Protein Alignment UPP1 and CG6330

DIOPT Version :10

Sequence 1:NP_003355.1 Gene:UPP1 / 7378 HGNCID:12576 Length:310 Species:Homo sapiens
Sequence 2:NP_733175.1 Gene:CG6330 / 43240 FlyBaseID:FBgn0039464 Length:368 Species:Drosophila melanogaster


Alignment Length:304 Identity:154/304 - (50%)
Similarity:212/304 - (69%) Gaps:1/304 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     6 ANAEKAESHNDCPVRLLNPNIAKMKEDILYHFNLTTSRHNFPALFGDVKFVCVGGSPSRMKAFIR 70
            |..::...::|..|:|.|.||..|.:|||||..|.:..|:...:||||||||:||:|.||:.|..
  Fly    33 AYVKRITRYSDGTVKLRNSNIELMDQDILYHLALGSESHDLQEMFGDVKFVCMGGTPKRMENFAH 97

Human    71 CVGAELGLDCP-GRDYPNICAGTDRYAMYKVGPVLSVSHGMGIPSISIMLHELIKLLYYARCSNV 134
            .:..|:|...| |....:|.|.:.||:||||||||.||||||.||:||::||:|||:|:|:|.:.
  Fly    98 FIMNEIGYKLPAGTQLQDISAYSYRYSMYKVGPVLCVSHGMGTPSVSILMHEMIKLMYHAKCKDP 162

Human   135 TIIRIGTSGGIGLEPGTVVITEQAVDTCFKAEFEQIVLGKRVIRKTDLNKKLVQELLLCSAELSE 199
            ..|||||.||||::.|||:|||.|:|...:...|..:|||.:.|...|:|||.:||...::....
  Fly   163 VFIRIGTCGGIGVDGGTVIITEDALDGQLRNSHEFTILGKTIHRPAKLDKKLARELKSLASPDDP 227

Human   200 FTTVVGNTMCTLDFYEGQGRLDGALCSYTEKDKQAYLEAAYAAGVRNIEMESSVFAAMCSACGLQ 264
            :.|::|.|:||.||||||||||||.|.::|.:|.||||.....||.||||||::|||:....|::
  Fly   228 YDTIIGKTLCTNDFYEGQGRLDGAFCDFSENEKMAYLEKLRENGVVNIEMESTIFAALTHHAGIK 292

Human   265 AAVVCVTLLNRLEGDQISSPRNVLSEYQQRPQRLVSYFIKKKLS 308
            ||||||.|||||.|||:::|:.|::|:|.|||.|||.:|:|.|:
  Fly   293 AAVVCVALLNRLNGDQVNAPKEVMNEWQARPQILVSRYIRKVLT 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UPP1NP_003355.1 UP_hUPP-like 31..305 CDD:350163 144/274 (53%)
CG6330NP_733175.1 UP_hUPP-like 59..333 CDD:350163 144/273 (53%)

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