DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42259 and LOC100487969

DIOPT Version :9

Sequence 1:NP_001036256.2 Gene:CG42259 / 7354475 FlyBaseID:FBgn0266569 Length:92 Species:Drosophila melanogaster
Sequence 2:XP_002941834.2 Gene:LOC100487969 / 100487969 -ID:- Length:162 Species:Xenopus tropicalis


Alignment Length:108 Identity:27/108 - (25%)
Similarity:37/108 - (34%) Gaps:28/108 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LHSNYLFLIGGCCL--------VF-----AVSAQIPITPRRCPANETFLACGPDCQTECATLGK- 52
            |:|.....||.|.|        ||     :|...:......||||..|.:|....:..||.|.. 
 Frog    57 LNSTSETCIGPCTLDCDCVDGFVFESDQSSVCVNVSTCKVSCPANMHFDSCVKTDRRTCAMLNST 121

  Fly    53 ----PCLVRHIRCPDGCYCNKGFA----RNAAGTCIPLRRCNE 87
                |      .|...|.|::||.    ......||.:..|::
 Frog   122 PNSLP------SCVQRCVCDEGFVIADDTEEKPKCIKISECSK 158

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42259NP_001036256.2 TIL 30..85 CDD:280072 17/63 (27%)
LOC100487969XP_002941834.2 TIL 37..94 CDD:410995 9/36 (25%)
TIL 98..156 CDD:410995 17/63 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1625853at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X701
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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