DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42340 and KCO2

DIOPT Version :10

Sequence 1:NP_001368973.1 Gene:CG42340 / 7354472 FlyBaseID:FBgn0259242 Length:759 Species:Drosophila melanogaster
Sequence 2:NP_199449.1 Gene:KCO2 / 834680 AraportID:AT5G46370 Length:443 Species:Arabidopsis thaliana


Alignment Length:151 Identity:36/151 - (23%)
Similarity:70/151 - (46%) Gaps:26/151 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   374 ISICVCVLLCYVSSGAIL-------FHKLQNWSVLESLYFCFTSLGTIGFGEMAPNGAVALYTAS 431
            ::..|.:|:.|:|.|.::       ::..|...|:::||||..::.|||:|::.|:..|....:.
plant   146 VNQAVALLVVYLSLGVLIYWLNRDSYNVKQTHPVVDALYFCIVTMCTIGYGDITPDSVVTKLFSI 210

  Fly   432 AYILVGMAVVAMCFSLIQTEIVLWLRRFSVQDHVM---PKAEELAL------VTVAVTPKPSXQR 487
            .::|||...:.:..|.:.|.::      .:|::.|   .:.|.|.|      .:..:..|.. .|
plant   211 FFVLVGFGFMDILLSGMVTYVL------DLQENYMLETARNESLNLNDRDKVRSYIIDVKKGRMR 269

  Fly   488 PSADPSLGVGLGVGLAGGALG 508
                ..|.|||.:|:....||
plant   270 ----IRLKVGLALGVVVLCLG 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42340NP_001368973.1 Ion_trans_2 <208..264 CDD:462301
Ion_trans_2 380..453 CDD:462301 21/79 (27%)
KCO2NP_199449.1 Ion_trans_2 152..233 CDD:462301 21/86 (24%)
Ion_trans_2 280..350 CDD:462301 2/7 (29%)
FRQ1 <374..>426 CDD:444056
Blue background indicates that the domain is not in the aligned region.

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