DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42340 and Kcnk10

DIOPT Version :9

Sequence 1:NP_001368973.1 Gene:CG42340 / 7354472 FlyBaseID:FBgn0259242 Length:759 Species:Drosophila melanogaster
Sequence 2:NP_001303594.1 Gene:Kcnk10 / 72258 MGIID:1919508 Length:538 Species:Mus musculus


Alignment Length:496 Identity:108/496 - (21%)
Similarity:180/496 - (36%) Gaps:173/496 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 GGSLCGCQKAPKSHCISATGVLLLVLLYTAMGSIVFVTLEGELEDGGALETAVAASKPYPRTELA 143
            |.|..|.|...|...:.|  :.::|::|...|.:||..||...|  .:.:..:|..|        
Mouse    57 GASQGGLQTVMKWKTVVA--IFVVVVVYLVTGGLVFRALEQPFE--SSQKNTIALEK-------- 109

  Fly   144 NAEIRSRTVDRLWSITEDLNILYKENWTRLAAQEVQLFQDTLLRAVRQSKVYPPGGIQLNAPTHK 208
             ||                   :..:...::.||::......|.|  .:....|.|...|:.:| 
Mouse   110 -AE-------------------FLRDHICVSPQELETLIQHALDA--DNAGVSPVGNSSNSSSH- 151

  Fly   209 WTYASAFLYSLTLITTIGYGGISPRTQWGRVAALVYALFGIPIVLLYLSAMGEALSAGMRCLFRR 273
            |...|||.::.|:|||||||.|:|.|:.|::..::||:||||:....|:.:|:.|..    :|.:
Mouse   152 WDLGSAFFFAGTVITTIGYGNIAPSTEGGKIFCILYAIFGIPLFGFLLAGIGDQLGT----IFGK 212

  Fly   274 Q--RVKGGPGGGPGGGASGGVGSGAGGSGGGRKTDKNKGQGHYGHQKLHQYGLPPSVYQQQQAQQ 336
            .  ||:                                                 .|::::|..|
Mouse   213 SIARVE-------------------------------------------------KVFRKKQVSQ 228

  Fly   337 AQQAQQQQAQQAQQAQQQQVQQGKKSSGNRRGSPSVPISICVCVLLCYVSSGAILFHKLQNWSVL 401
            .:                           .|...::...:..|::  :|:..|::|..::.|:.|
Mouse   229 TK---------------------------IRVISTILFILAGCIV--FVTIPAVIFKYIEGWTAL 264

  Fly   402 ESLYFCFTSLGTIGFGEMAPNGAVALYTASAY-------ILVGMAVVAMCFSLIQTEIVLWLRRF 459
            ||:||...:|.|:|||:....|...:.....|       ||||:|..|...|:|..    |||..
Mouse   265 ESIYFVVVTLTTVGFGDFVAGGNAGINYREWYKPLVWFWILVGLAYFAAVLSMIGD----WLRVL 325

  Fly   460 S---------VQDHVMPKAEELALVT---------VAVTPKPSXQRPSADPSLGVGLGVGLAGGA 506
            |         ::.|.   ||..|.||         ::|..... ||.:...|:            
Mouse   326 SKKTKEEVGEIKAHA---AEWKANVTAEFRETRRRLSVEIHDKLQRAATIRSM------------ 375

  Fly   507 LGQPQNNLGQHQTMFFGPAHTLTQYSSLPRRSHLQAANNSG 547
               .:..||..|.     ||:|...|  |.:..:.||.::|
Mouse   376 ---ERRRLGLDQR-----AHSLDMLS--PEKRSVFAALDTG 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42340NP_001368973.1 Ion_trans_2 <208..264 CDD:400301 24/55 (44%)
Ion_trans_2 380..453 CDD:400301 24/79 (30%)
Kcnk10NP_001303594.1 Ion_trans_2 <152..206 CDD:369572 24/53 (45%)
Ion_trans_2 244..323 CDD:369572 26/84 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167845607
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1418
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11003
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.840

Return to query results.
Submit another query.