DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42340 and Kcnk12

DIOPT Version :9

Sequence 1:NP_001368973.1 Gene:CG42340 / 7354472 FlyBaseID:FBgn0259242 Length:759 Species:Drosophila melanogaster
Sequence 2:XP_038968799.1 Gene:Kcnk12 / 64119 RGDID:68940 Length:521 Species:Rattus norvegicus


Alignment Length:489 Identity:83/489 - (16%)
Similarity:147/489 - (30%) Gaps:221/489 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 CGCQKAPKSHCISATG--VLL--LVLLYTAMGSIVFVTLEGELEDGGALETAVAASKPYPRTELA 143
            |.|....:||....||  |||  |:.||...|:.||..||...|                     
  Rat    22 CCCCCCRRSHLNEDTGRFVLLAALIGLYLVAGATVFSALESPGE--------------------- 65

  Fly   144 NAEIRSRTVDRLWSITEDLNILYKENWTR---LAAQEVQLFQDTLLRAVRQSKVYPPGGIQLNAP 205
             ||.|:|     |..|       ..|::.   :|..|::.|       :|..:.....|::.:|.
  Rat    66 -AEARAR-----WGAT-------LRNFSAAHGVAEPELRAF-------LRHYEAALAAGVRADAL 110

  Fly   206 THKWTYASAFLYSLTLITTI--------------------------------------------- 225
            ..:|.:..||.:..|:::||                                             
  Rat   111 RPRWDFPGAFYFVGTVVSTIDSQIPTAAVCRHPKADQFMHPRPCVQLLGLSQSRSLATMLLKFQS 175

  Fly   226 ----------------------------------------------GYGGISPRTQWGRVAALVY 244
                                                          |:|..:|.|..|:...:.|
  Rat   176 SKLSTITPSTHWAFPVTPPLARGRGTSFRRRCCGCTWRLGLSVACPGFGMTTPATVGGKAFLIAY 240

  Fly   245 ALFGIPIVLLYLSAMGEALSAGMRCLFRRQRVKGGPGGGPGGGASGGVGSGAGGSGGGRKTDKNK 309
            .|||....:|:.:...|.:.:.:..:.|..|                                  
  Rat   241 GLFGCAGTILFFNLFLERIISLLAFIMRACR---------------------------------- 271

  Fly   310 GQGHYGHQKLHQYGLPPSVYQQQQAQQAQQAQQQQAQQAQQAQQQQVQQGKKSSGNRRGSPSV-- 372
                  .::|.:.||.|:.:::..|                     :.:....:|   ..|||  
  Rat   272 ------ERQLRRSGLLPATFRRGSA---------------------LSEADSLAG---WKPSVYH 306

  Fly   373 ---PISICVCVLLCYVSSGAILFHKLQNWSVLESLYFCFTSLGTIGFGEMAPNGAVALYTASAY- 433
               .:.:...:|.|..|:   ::..::.|..::||||||.:..|||||::..:...|......| 
  Rat   307 VLLILGLFAVLLACCASA---MYTSVEGWDYVDSLYFCFVTFSTIGFGDLVSSQHAAYRNQGLYR 368

  Fly   434 ------ILVGMAVVAMCFSLIQ---TEIVLWLRR 458
                  ||:|:..:...|::|.   .:::.|:.|
  Rat   369 LGNFLFILLGVCCIYSLFNVISILIKQVLNWMLR 402

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42340NP_001368973.1 Ion_trans_2 <208..264 CDD:400301 17/146 (12%)
Ion_trans_2 380..453 CDD:400301 22/82 (27%)
Kcnk12XP_038968799.1 Ion_trans_2 313..395 CDD:400301 22/84 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166349034
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4404
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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