DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42340 and kcnk13a

DIOPT Version :9

Sequence 1:NP_001368973.1 Gene:CG42340 / 7354472 FlyBaseID:FBgn0259242 Length:759 Species:Drosophila melanogaster
Sequence 2:NP_001103587.1 Gene:kcnk13a / 571467 ZFINID:ZDB-GENE-080219-46 Length:409 Species:Danio rerio


Alignment Length:513 Identity:100/513 - (19%)
Similarity:173/513 - (33%) Gaps:188/513 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 GGSLCGCQKAPKSHCISATGVLLLVLLYTAMGSIVFVTLEGELEDGGALETAVAASKPYPRTELA 143
            |...|||....:.:. ....:|||::||...|:.||..||                  :|:.:||
Zfish     5 GSCCCGCGPVNEDNA-RFIMLLLLIILYLLCGAAVFSALE------------------HPKEKLA 50

  Fly   144 NAEIRSRTVDRLWSITEDLNILYKENWTR---LAAQEVQLFQDTLLRAVRQSKVYPPGGIQLNAP 205
                                   ||.|.:   |.:|:..|.:..|...:|..:.....||:::..
Zfish    51 -----------------------KERWAQRFELFSQKYNLNKSDLENFLRHYEEANMAGIRVDTL 92

  Fly   206 THKWTYASAFLYSLTLITTIGYGGISPRTQWGRVAALVYALFGIPIVLLYLSAMGE----ALSAG 266
            ..:|.:..||.:..|:::|||:|..:|.|..|::..:.|.|.|....:|:.:...|    .|:..
Zfish    93 RPRWDFTGAFYFVGTVVSTIGFGMTTPATVGGKIFLIFYGLIGCAATILFFNLFLERIITVLAFV 157

  Fly   267 MRCLFRRQRVKGGPGGGPGGGASGGVGSGAGGSGGGRKTDKNKGQGHYGHQKLHQYGLPPSVYQQ 331
            ::.....||                               :.||.            ||      
Zfish   158 LKSCHEIQR-------------------------------RRKGV------------LP------ 173

  Fly   332 QQAQQAQQAQQQQAQQAQQAQQQQVQQGKKSSGNRRGSPSVPISICVCVLLCYVS-----SGAIL 391
                       ..::|..:...:....|.|        |||   .||.::||..:     ..:.:
Zfish   174 -----------HDSRQDSRLNHEDSLAGWK--------PSV---YCVMLILCVAAIIISCCASAM 216

  Fly   392 FHKLQNWSVLESLYFCFTSLGTIGFGEMAPNGAVALYTASAY-------ILVGMAVVAMCF---S 446
            :..::.|..|:||||||.:..|||||:|..:........:.|       ||:|:..:...|   |
Zfish   217 YSSIEGWRYLDSLYFCFVAFSTIGFGDMVSSQRAIYENQTVYRICNFLFILMGVCCIYSLFNVIS 281

  Fly   447 LIQTEIVLWL------------------RRFSVQ-DHVMPKAEELALVTVAVTPKPSXQRPSADP 492
            ::..:::.||                  ||.:|. .|:..:...:::.|.||....: .|..:..
Zfish   282 IVIKQVLNWLLKKLKIPCRHCHRRSLRPRRNAVMPSHLRTRVRNISIDTDAVNDSETDGRRLSGE 346

  Fly   493 SLG---------VGLGV-----------------------GLAG--GALGQPQNNLGQ 516
            .:.         |.|.:                       |.:|  ||||...|.|.:
Zfish   347 MISMRDFLAANKVNLAIMQKQLSETANGHPRPGGSTNRHNGFSGGVGALGIMNNRLAE 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42340NP_001368973.1 Ion_trans_2 <208..264 CDD:400301 16/59 (27%)
Ion_trans_2 380..453 CDD:400301 22/87 (25%)
kcnk13aNP_001103587.1 Ion_trans_2 89..151 CDD:285168 16/61 (26%)
Ion_trans_2 202..286 CDD:285168 22/83 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170590230
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4404
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.740

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